Transcript Information: S_Transcript_269285.p1


Annotated TAIR IDAT3G23330.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8347200-8349347 | Forward length=715
E-Value3.6e-315
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91647421472145
Replicate 20.40911132954332
Replicate 30.46412183521644
Condition 2: 8 Hour
Replicate 12.0336796064021
Replicate 22.4594217709898
Replicate 32.2303999480709
Condition 3: 24 Hour
Replicate 10.37613706672546
Replicate 20.84051221740096
Replicate 31.0022004399384


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_269285.p1 GENE.S_Transcript_269285~~S_Transcript_269285.p1 ORF type:5prime_partial len:755 (+),score=113.40,PPR|PF01535.16|72,PPR|PF01535.16|0.00095,PPR|PF01535.16|98,PPR|PF01535.16|3.9e-05,PPR|PF01535.16|0.53,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.9,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|0.0046,PPR|PF01535.16|1.7,PPR|PF01535.16|5,PPR|PF01535.16|14,PPR|PF01535.16|2.1e+03,DYW_deaminase|PF14432.2|7.8e-45,PPR_2|PF13041.2|8.9e+03,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|14,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|25,PPR_2|PF13041.2|8.5e-09,PPR_2|PF13041.2|49,PPR_2|PF13041.2|2.4e-09,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|96,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|2.4e+02,PPR_2|PF13041.2|2.3e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|28,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|0.0085,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|7.1e+03,PPR_3|PF13812.2|0.036,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|36,PPR_3|PF13812.2|1.2e+02,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|2e+02,PPR_1|PF12854.3|0.0054,PPR_1|PF12854.3|0.57,PPR_1|PF12854.3|0.36 S_Transcript_269285:2-2266(+)
AAACCAATGGGAACGACAGCCACATTTTCATCTTCAACTGTAATCCTCAAGAAACTTCTAAAGACCCCAACTTCCATTACCTCAAAAACCCAAGCCCAACAACTCCATGCCCAGATCATCAAACACAAAGGACTCAACCCCCATTACCTCTCCACCCTTCTTTCTATTTACTCTAACCTCAATCTCTTACCTGAATCACTCAAGATTTTCAATGCCCTTCATTCTCCCCCTTCTCTTGCTTGGAAATCTATCATTAGATGCTACACTTCTTGCGGCTTTTCTTTCGAATGTTTGTCTTGTTTTAATCAAATGAGAGCTTCTGGGCTTTGCCCTGATCATAATGTCCTCCCCTCTGTGATAAGGTCATGTACTTTGTTGAAAAGCTTGAGACTTGGTGAATCTGTTCATTGTTGTGTTATACGTGCTGGTCTTGATATTGATGTTTATACTTGTAATGCCCTTATGAACATGTATTCAAAATTGGAAAGTGGGTATGGAATTGGTGAGGACAGAGGTCATGCCCGCCAACCGTTCGACGAAATGCCTCAACGAAATTTGGTAGGTAGGAGCTTGGGTGATGATCATGTGATTGACCAATTTGAAAAAGGGGTAGTGAGTTTCCATCAAAAGTTTGATGTGGATATAATAGATAGTGATGTTAATAGTGCTAAGAGCACTAGAGTAGGTTCGAGGAAAAATGGGGTACAGAAGGTATTTGAGATGATGGCAGTGAGAGATCTTGTGTCTTGGAACACTGTTATTGCAGCAAATACACAAAATGGGATGTTTGAAGAAGCTTTAGATATGATTAGGAGCATGGGAAATGCAAACTTGAAGCCGGATGCTTTTAGTCTTTCCAGTGTGCTACCTATGTTTGCAGAACTTGCTGATGTCCATAGGGGGAAGGAAATTCATGGCTTTGCAATGAGGAACAGACTTGATGCCCATTTGTACGTTGGAAGTGGGTTGATTGACATGTATGCAAAGTGTAATCGAATAGAGGATGCACACAAGATGTTTGTTATGTTACCTTGTCGTGATAGCATTTCGTGGAACTCTATCATAGCCGGGTGTGTGCAAAATGGTTTCTTTGATGATGGTCTAAGACTGTTTAGGGAGATGATAATGGCCAAGGTTAAGCCTGGGAATGTTTCATTTTCAAGCATCATTCCAGCTTGTGCACATCTAACAACACTACGTTTAGGGAAACAATTACATGGATACATAATAAGGTGTAGATTCGAGGAGAATGTACTTATAGCTAGTTCATTGGTGGACATGTATGCAAAATGTGGTCACATAAAGATTGCTAGGTGTATATTCAATAAAATAAAGCTTCACGACATAGTGTCATGGACAGCCATGATCATGGGATATGCTGTACATGGGCATGCTCATGATGCCCTTTCCTTATTTAAGCAAATGGAAATCGCGGGAGTAAAACCCAACTCTGTTGCTTTTGTAGCTGTTTTAACTGCTTGCAGTCATGCAGGTTTGGTAGATGAAGCCCAAAGTTACTTTAACAGGATGATCCATGATTATCAGCTATCTCCACACTTGGAGCACTATGCTGCAGTAGCGGACCTTCTTGGCCGATCTGGAAGGTTGAAGGAAGCTTATGATTTTGTCCGTAAGATGACTGATCCGACAGGCAGTGTTTGGTCCACATTGCTTGCTGCTTGCCGAGTGCATAAAAATGTTGAAATGGCTGAAAAGGTTGCAAACGAATTATTCAGAGTTGATCCCAAAAACATGGGAGCTTATGTTCTCATGTCAAACATATACTCTGCTGCAAAGAGATGGAAAGAGGCTGCACAGGTGAGAATAGCCATGAGGAACAAAGGCATAAAAAAGAAACCTGCTTGCAGCTGGATTGAAGTCCAAAATAAGTTACATGCTTTTGTAGCTGGAGATAAATCTCATCCATATTATGACCAGATAAAGAAAGCTTTAGATGACTTACTGGAGCGGATGGAGAAAGAAGGCTATGTTCCTGACACAAGCGAGGTGCTTCATGATGTAGATGAGGAGTATAAGAAGACTTTGCTCTTTAGTCATAGTGAGAGACTGGCCATTGCATTTGGCATAATAAGTACTCCCAGGGGAATGACAATATGTGTGACCAAGAACATACGGGTATGCATCGATTGCCATACTGCTATCAAGTTTATGTCCAAGATTGTTGGGAGGGAAATCGTTGTTAGGGATAATAGTAGGTTTCATCATTTCAAAGATGGCAAGTGTTCATGTGGAGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_269285.p1 GENE.S_Transcript_269285~~S_Transcript_269285.p1 ORF type:5prime_partial len:755 (+),score=113.40,PPR|PF01535.16|72,PPR|PF01535.16|0.00095,PPR|PF01535.16|98,PPR|PF01535.16|3.9e-05,PPR|PF01535.16|0.53,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|1.9,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|0.0046,PPR|PF01535.16|1.7,PPR|PF01535.16|5,PPR|PF01535.16|14,PPR|PF01535.16|2.1e+03,DYW_deaminase|PF14432.2|7.8e-45,PPR_2|PF13041.2|8.9e+03,PPR_2|PF13041.2|0.38,PPR_2|PF13041.2|14,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|25,PPR_2|PF13041.2|8.5e-09,PPR_2|PF13041.2|49,PPR_2|PF13041.2|2.4e-09,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|96,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|2.4e+02,PPR_2|PF13041.2|2.3e+02,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|28,PPR_3|PF13812.2|1.5e+03,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|0.0085,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|7.1e+03,PPR_3|PF13812.2|0.036,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|36,PPR_3|PF13812.2|1.2e+02,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|0.0035,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|2e+02,PPR_1|PF12854.3|0.0054,PPR_1|PF12854.3|0.57,PPR_1|PF12854.3|0.36 S_Transcript_269285:2-2266(+)
KPMGTTATFSSSTVILKKLLKTPTSITSKTQAQQLHAQIIKHKGLNPHYLSTLLSIYSNLNLLPESLKIFNALHSPPSLAWKSIIRCYTSCGFSFECLSCFNQMRASGLCPDHNVLPSVIRSCTLLKSLRLGESVHCCVIRAGLDIDVYTCNALMNMYSKLESGYGIGEDRGHARQPFDEMPQRNLVGRSLGDDHVIDQFEKGVVSFHQKFDVDIIDSDVNSAKSTRVGSRKNGVQKVFEMMAVRDLVSWNTVIAANTQNGMFEEALDMIRSMGNANLKPDAFSLSSVLPMFAELADVHRGKEIHGFAMRNRLDAHLYVGSGLIDMYAKCNRIEDAHKMFVMLPCRDSISWNSIIAGCVQNGFFDDGLRLFREMIMAKVKPGNVSFSSIIPACAHLTTLRLGKQLHGYIIRCRFEENVLIASSLVDMYAKCGHIKIARCIFNKIKLHDIVSWTAMIMGYAVHGHAHDALSLFKQMEIAGVKPNSVAFVAVLTACSHAGLVDEAQSYFNRMIHDYQLSPHLEHYAAVADLLGRSGRLKEAYDFVRKMTDPTGSVWSTLLAACRVHKNVEMAEKVANELFRVDPKNMGAYVLMSNIYSAAKRWKEAAQVRIAMRNKGIKKKPACSWIEVQNKLHAFVAGDKSHPYYDQIKKALDDLLERMEKEGYVPDTSEVLHDVDEEYKKTLLFSHSERLAIAFGIISTPRGMTICVTKNIRVCIDCHTAIKFMSKIVGREIVVRDNSRFHHFKDGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST