Transcript Information: S_Transcript_269583.p1


Annotated TAIR IDAT3G27340.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:10121303-10122692 | Forward length=141
E-Value9E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3285555708047
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.26327642366831
Replicate 20.55239132443769
Replicate 30.78947583722153
Condition 3: 24 Hour
Replicate 10
Replicate 20.27980014291787
Replicate 30.31138326426069


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_269583.p1 GENE.S_Transcript_269583~~S_Transcript_269583.p1 ORF type:5prime_partial len:81 (+),score=4.89 S_Transcript_269583:2-244(+)
ACATTCAGTCTACCAGCTGAATTTCTCAGAATATACAGCCCTGCCGCTGACAGCAAGATACGTTCCATTGGGGGTGAAAAGGTGAATTTTGTCATTAAACTTCTGCTGTATCTCTGGTTATTATTTTTGGCTGCTGAGTTTCATTATATGAAAGACTGTAGAGCTTGTTCATCTGTAGAAAAAGTTAAGTACTCGCCAACAGTGGAAAAAAGTTGCCGTTCCAAAAAATGTTTAGACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_269583.p1 GENE.S_Transcript_269583~~S_Transcript_269583.p1 ORF type:5prime_partial len:81 (+),score=4.89 S_Transcript_269583:2-244(+)
TFSLPAEFLRIYSPAADSKIRSIGGEKVNFVIKLLLYLWLLFLAAEFHYMKDCRACSSVEKVKYSPTVEKSCRSKKCLDI*

Click here to download the sequence:
Link to NCBI Protein BLAST