Transcript Information: S_Transcript_269603.p1


Annotated TAIR IDAT5G09530.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2960080-2961192 | Reverse length=370
E-Value6.2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1324681376673
Replicate 21.4082631632456
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.3173311863791
Replicate 30.1511762241488
Condition 3: 24 Hour
Replicate 10.30985650341268
Replicate 20.16073625231452
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_269603.p1 GENE.S_Transcript_269603~~S_Transcript_269603.p1 ORF type:complete len:141 (+),score=39.46,Cornifin|PF02389.11|6.8e-06 S_Transcript_269603:62-484(+)
ATGGCTTTTCACTTGTTTCTATTCGGTGTGATGGTCGTTGCCTGCATGATGAGTGCTATCATGATGCCAGTGTCTGCTCGCCTCCTTCTGGAAACATCCTTGCCCGAGCTTCCAAAGCCAGAGCTGCCAAAGTTTCCTGAGTTGCCAAAGCCAGCAATGCCTGAACTTCCTAAGCCTACAATTCCTGAGATACCCAAACCAAAATTGCCCGAGTTGCCAAAGCCCACAGTTCCGGAACATCCCAAGCCCACATTGCCCGAGCTTCCTAAGCCTGCAGTCCCTGAGGTTCCTAAGCCCACATTGCCTGAGTTGCCAAAGTCAGCAGTTCCTGAACTTCCCAAGGCTAGTGAGCATGAATTGCCCAAACCTACACTTCCTCAAGTGCCTAAGCCGGCTCTTCCTGACGTCCCAAGCAAGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_269603.p1 GENE.S_Transcript_269603~~S_Transcript_269603.p1 ORF type:complete len:141 (+),score=39.46,Cornifin|PF02389.11|6.8e-06 S_Transcript_269603:62-484(+)
MAFHLFLFGVMVVACMMSAIMMPVSARLLLETSLPELPKPELPKFPELPKPAMPELPKPTIPEIPKPKLPELPKPTVPEHPKPTLPELPKPAVPEVPKPTLPELPKSAVPELPKASEHELPKPTLPQVPKPALPDVPSKP*

Click here to download the sequence:
Link to NCBI Protein BLAST