Transcript Information: S_Transcript_26978.p1


Annotated TAIR IDAT1G54200.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20235855-20236955 | Forward length=366
E-Value3.9E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.99560107045
Replicate 28.7117089607944
Replicate 38.9197345077227
Condition 2: 8 Hour
Replicate 16.9755949635482
Replicate 24.5998193464858
Replicate 36.5740464576111
Condition 3: 24 Hour
Replicate 114.903518643116
Replicate 213.238207696465
Replicate 312.375302161389


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26978.p1 GENE.S_Transcript_26978~~S_Transcript_26978.p1 ORF type:complete len:428 (+),score=34.41 S_Transcript_26978:390-1673(+)
ATGAGTACATCTACCCTCTGCAGAACCCTTCTCCGGGATCCAGATTACCACCACCACCACCACCAACATACACATTTTCCCGAGCATCATAAGAACAACAATCATCATCCGTCTTTCTCCTCTACGCTTCTCGAGGAGATTTACCGCTCCTTCGACGAGGAGAAAGAAATCCGCCGCTCCTCTTCTTCGGATACTTACAGCAGAATCAAGATGATGAAGAACAATCACAGTAACAATTACCTCGAGAGGGACAATAATCGTTTCGCTATCGATAAGTGGATTGAAAACGAGAAGCTCATTCTCCGACGATCAGCTCAATTCGACTCCAAATCTCACCGAGTTCCGATCAACCACTCTTCTTCAACCAGCTCCTCCGATTCCAGCTCCGGTATCGGAGGTTTCTCGTCATCCGACACGGAATCTCTGTACGGACACTCGACGTCCAGGCCGGCCAAGCAGAAGCAAAATTCGCTGCCGTTGAAGCCGATCCGTACCACGCCGGAGTTTCACCGGAAAAGCTACTCCGACGAGATTCCGGCGAAGAACAGCAAGAAGAAGGAAGGAAACCTCCAACGGCGAGCATTGAAGCTTTACGGCGACTTGAAGAAGGTCAAGCAGCCTATCTCGCCGGGAGGCAAGCTTGCTACCTTCCTCAACTCAATCTTCAACGCTAAAAAAGCAAAGACGTCATCATCTTCGATCTCCACGTCAGCATCCTCGCCGACAATCTCTTCTAACAGGAGAGATTTATATTCAGCTTCGACGCCGTCGACGGCATCTCGGTCTTGCCTGAGCAAAACGCCGTCGTCCGCCGGAAGGTTTGAGAGGAGGTCAGTTAGGTTCGTCGACGACGAAGAAAGAGATTACCGGAGGAACGGTAACAGTGACGTGGCGAAACGTGATTCGTCGACATTGGCGAACGACGAGGAGTTCAAGCTTCAAATAAGGGAGAAACAGCGACGAGTTGAGGAAGTTGCTAAAGAGTTGTTGAAGATCAATTATCACACTAGGAAAGAATTAACAGTAAATATTATTCCTGATGATAATACTAATAAAAATAAAAATAGATACAACGGTCAGAAATTCCATAATGACGTCATTATTCCTGGTTTCGAAGACGACGATGAAGAAGATGATGAAGCTAGTTGTTGTAGCTCGGATTTGTTCGAGCTCGAGAATTTGCTAGATATTGGCGTAGTACACCGGTACCGTGAAGAATTGCCGGTTTATGAGACCACTCATGTTGGTACTAATAGGGCTATTGCTAATGGTTTAATCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26978.p1 GENE.S_Transcript_26978~~S_Transcript_26978.p1 ORF type:complete len:428 (+),score=34.41 S_Transcript_26978:390-1673(+)
MSTSTLCRTLLRDPDYHHHHHQHTHFPEHHKNNNHHPSFSSTLLEEIYRSFDEEKEIRRSSSSDTYSRIKMMKNNHSNNYLERDNNRFAIDKWIENEKLILRRSAQFDSKSHRVPINHSSSTSSSDSSSGIGGFSSSDTESLYGHSTSRPAKQKQNSLPLKPIRTTPEFHRKSYSDEIPAKNSKKKEGNLQRRALKLYGDLKKVKQPISPGGKLATFLNSIFNAKKAKTSSSSISTSASSPTISSNRRDLYSASTPSTASRSCLSKTPSSAGRFERRSVRFVDDEERDYRRNGNSDVAKRDSSTLANDEEFKLQIREKQRRVEEVAKELLKINYHTRKELTVNIIPDDNTNKNKNRYNGQKFHNDVIIPGFEDDDEEDDEASCCSSDLFELENLLDIGVVHRYREELPVYETTHVGTNRAIANGLIL*

Click here to download the sequence:
Link to NCBI Protein BLAST