Transcript Information: S_Transcript_26997.p1


Annotated TAIR IDAT5G43822.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17620830-17621868 | Forward length=195
E-Value6.2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9240958733964
Replicate 211.899032570345
Replicate 38.9105354111778
Condition 2: 8 Hour
Replicate 111.381528540043
Replicate 214.076668807019
Replicate 313.771474576252
Condition 3: 24 Hour
Replicate 114.604163681914
Replicate 28.4034357530277
Replicate 39.0686002355474


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_26997.p1 GENE.S_Transcript_26997~~S_Transcript_26997.p1 ORF type:5prime_partial len:178 (+),score=43.39,CK2S|PF15011.2|1.4e-37 S_Transcript_26997:2-535(+)
TGGGAACTTCTTCAATCTCGCTTGCTTTCCCAGTTCTCCAATGCTTCTTCCATCATTGAAAGACTACATGTAATTGGAGATAACAAGAACTATGGTAGCTTGAAAGGGGTTGATGGGATTGAGGAGTCTGTTTTGCAAAAACAAATGGAGTCTTTGGAAACCATTCTTCTTTCAATTAACACCACCAAGGAAGGCTTCCATGGAGTTGTGTTGTCACTCGAAAAGATGGTCCGAGATAGTAAGCAGCTTGTCAGAGGAGGGTCTCAACCAGTTTCTGTTAAACAACTGCGACAAAGATTGGGTGTCAAACCAAGCCTTTCAGATTGCTTAGATGGGCTCACTATCCTACATGAGATGCATAATTCAGAGTACCTTTTCAAAACATCAGTGGTTCCAGCACTCTTGAAAATTGCTTTGAAACCCAGTGCCACTGATCTGGGAGCGCTGCGCCAACTTTTGGTTGATCAGCCTAATATTCCAAAAGATGAAGTGGAATTCATATTTGATGTCATATTTGCTGAAGACATGTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_26997.p1 GENE.S_Transcript_26997~~S_Transcript_26997.p1 ORF type:5prime_partial len:178 (+),score=43.39,CK2S|PF15011.2|1.4e-37 S_Transcript_26997:2-535(+)
WELLQSRLLSQFSNASSIIERLHVIGDNKNYGSLKGVDGIEESVLQKQMESLETILLSINTTKEGFHGVVLSLEKMVRDSKQLVRGGSQPVSVKQLRQRLGVKPSLSDCLDGLTILHEMHNSEYLFKTSVVPALLKIALKPSATDLGALRQLLVDQPNIPKDEVEFIFDVIFAEDMC*

Click here to download the sequence:
Link to NCBI Protein BLAST