Transcript Information: S_Transcript_270025.p1


Annotated TAIR IDAT5G60040.2
Annotated Gene Namenuclear RNA polymerase C1
Annotated Gene Symbol(s)NRPC1
Annotation TypeOrtholog
Chromosome Positionchr5:24173590-24183269 | Forward length=1391
E-Value1.8E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.37394558572059
Replicate 30
Condition 2: 8 Hour
Replicate 10.18072364675536
Replicate 20.56877581287441
Replicate 30.1806427763134
Condition 3: 24 Hour
Replicate 10
Replicate 20.76826479919822
Replicate 31.068730695132


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270025.p1 GENE.S_Transcript_270025~~S_Transcript_270025.p1 ORF type:5prime_partial len:118 (+),score=3.04,RNA_pol_Rpb1_2|PF00623.16|6.2e-19 S_Transcript_270025:2-355(+)
AGGACTGTTATATCGCCTGATCCTAATCTGAAAATTACAGAGGTTGCAGTTCCACAGTTGATGGCGTCAATCTTAACTTATCCTGAACGTGTCAATCATCACAACATTGAAAAGCTGAGCCAATGTGTACGTAATGGGCCAAAGAAGTATCCCAGTGCAAAGCTGGTAGTGAAACCCAATGGTGATCAAATGTGCGACTTTATCTTTTTTCCTTTTTTTCCCTTTTTTTTTTTTGATTTTTTTAAACAGCAAGAGAGATTACCTCTGTCGTCCTGCAGATTGTATAAATGGCTATTATGTTATTTTGGTAGGATTGCTTATGCTATCTTGCAGAGATTTAACATTTGCAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270025.p1 GENE.S_Transcript_270025~~S_Transcript_270025.p1 ORF type:5prime_partial len:118 (+),score=3.04,RNA_pol_Rpb1_2|PF00623.16|6.2e-19 S_Transcript_270025:2-355(+)
RTVISPDPNLKITEVAVPQLMASILTYPERVNHHNIEKLSQCVRNGPKKYPSAKLVVKPNGDQMCDFIFFPFFPFFFFDFFKQQERLPLSSCRLYKWLLCYFGRIAYAILQRFNICR*

Click here to download the sequence:
Link to NCBI Protein BLAST