Transcript Information: S_Transcript_27004.p1


Annotated TAIR IDAT5G43822.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17620830-17621868 | Forward length=195
E-Value5E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7820236594465
Replicate 24.136773042034
Replicate 32.3053420104501
Condition 2: 8 Hour
Replicate 12.9988830133468
Replicate 22.9712611474637
Replicate 33.3306011882783
Condition 3: 24 Hour
Replicate 14.7785682635675
Replicate 23.7182815867445
Replicate 31.3793305534048


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27004.p1 GENE.S_Transcript_27004~~S_Transcript_27004.p1 ORF type:5prime_partial len:128 (+),score=24.91,CK2S|PF15011.2|8.4e-18 S_Transcript_27004:2-385(+)
TTGGTTAGAAGGTGGTGTGATTTTGAATTCCCTAAAACAATAGAAGTTGATACTGTTTGTAGGGAAGGCTTCCATGGAGTTGTGTTGTCACTCGAAAAGATGGTCCGAGATAGTAAGCAGCTTGTCAGAGGAGGGTCTCAACCAGTTTCTGTTAAACAACTGCGACAAAGATTGGGTGTCAAACCAAGCCTTTCAGATTGCTTAGATGGGCTCACTATCCTACATGAGATGCATAATTCAGAGTACCTTTTCAAAACATCAGTGGTTCCAGCACTCTTGAAAATTGCTTTGAAACCCAGTGCCACTGATCTGGGAGCGCTGCGCCAACTTTTGGTTGATCAGCCTAATATTCCAAAAGATGAAGGTATGCTATCATTGGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27004.p1 GENE.S_Transcript_27004~~S_Transcript_27004.p1 ORF type:5prime_partial len:128 (+),score=24.91,CK2S|PF15011.2|8.4e-18 S_Transcript_27004:2-385(+)
LVRRWCDFEFPKTIEVDTVCREGFHGVVLSLEKMVRDSKQLVRGGSQPVSVKQLRQRLGVKPSLSDCLDGLTILHEMHNSEYLFKTSVVPALLKIALKPSATDLGALRQLLVDQPNIPKDEGMLSLG*

Click here to download the sequence:
Link to NCBI Protein BLAST