Transcript Information: S_Transcript_270052.p1


Annotated TAIR IDAT5G45130.1
Annotated Gene NameRAB Homolog 1
Annotated Gene Symbol(s)ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, ATRAB-F2A,
Annotation TypeOrtholog
Chromosome Positionchr5:18244495-18246060 | Forward length=200
E-Value1.6E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7311264075599
Replicate 20.12122411844788
Replicate 30.30400114423517
Condition 2: 8 Hour
Replicate 10.35151742280989
Replicate 20.24584449054645
Replicate 30.70272025071367
Condition 3: 24 Hour
Replicate 10.2400536647318
Replicate 20.62263218616339
Replicate 30.41574798469972


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270052.p1 GENE.S_Transcript_270052~~S_Transcript_270052.p1 ORF type:complete len:182 (+),score=31.73,Ras|PF00071.18|5.3e-54,Roc|PF08477.9|3.9e-28,Roc|PF08477.9|1.6e+03,Arf|PF00025.17|7.1e-10 S_Transcript_270052:207-752(+)
ATGGGCACAGGAAAAACAAGCTTAGTACTGAGATTTGTCAAGGGCCAATTCTTTGATTACCAGGAATCGACAATTGGAGCAGCGTTTTTCACAGAGGTAGTGTCCCTAAATGAAGGTGCAATTAAGTTTGATATATGGGATACAGCAGGTCAAGAACGATACCACAGCTTGGCTCCTATGTACTACCGTGGAGCTGCTTCAGCTGTTGTTGTCTATGACATCACTAGTTTGGAATCATATGAGAAAGCGAAAAAGTGGGTTATGGAATTGCAGCTACAAGGGGGTCCTCGAGTCGTTACTGTGCTGGTGGGAAACAAGGCAGACCTCAATGAGAAGAGGCAGGTCAAAACTGAGATAGCTGAGCAATATGCTAAAGAAAACGGGTTGCATTTCTTTGAAACATCTGCCAAGACAGCCCAGAATGTCAACGAGCTCTTCTTCGACATTGCAAGGACATTAATAAGAACATTTCCATCACGTCCAATGGGAATGAAGTTGCAATCCAGACGACAACGCAGAGGGGGACTGTTCTGTTGCTCTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270052.p1 GENE.S_Transcript_270052~~S_Transcript_270052.p1 ORF type:complete len:182 (+),score=31.73,Ras|PF00071.18|5.3e-54,Roc|PF08477.9|3.9e-28,Roc|PF08477.9|1.6e+03,Arf|PF00025.17|7.1e-10 S_Transcript_270052:207-752(+)
MGTGKTSLVLRFVKGQFFDYQESTIGAAFFTEVVSLNEGAIKFDIWDTAGQERYHSLAPMYYRGAASAVVVYDITSLESYEKAKKWVMELQLQGGPRVVTVLVGNKADLNEKRQVKTEIAEQYAKENGLHFFETSAKTAQNVNELFFDIARTLIRTFPSRPMGMKLQSRRQRRGGLFCCSG*

Click here to download the sequence:
Link to NCBI Protein BLAST