Transcript Information: S_Transcript_270144.p2


Annotated TAIR IDAT2G05070.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.2
Annotated Gene Symbol(s)LHCB2.2, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1799436-1800329 | Reverse length=265
E-Value3.7E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6935546240569
Replicate 22.0057081415923
Replicate 31.5089511341128
Condition 2: 8 Hour
Replicate 11.3570702929085
Replicate 20
Replicate 30.96890216386279
Condition 3: 24 Hour
Replicate 10
Replicate 23.9146583631873
Replicate 30.22929131277378


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270144.p2 GENE.S_Transcript_270144~~S_Transcript_270144.p2 ORF type:3prime_partial len:110 (+),score=-17.79,Chloroa_b-bind|PF00504.17|8.8e-23 S_Transcript_270144:65-391(+)
ATGCTCGGCTCCAAGATCGCAAACCGCCCCGTTGTGGGTGCACTGGCTCCCAGCCGTGGCGTGGCAGCCCGCGCTGAGTGGTACGGCCCGGACCGCGCCAAGTGGCTCGGCCCGCTGTCCGAGAACGCTGTGCCAAGCTACCTGAACGGTGAGTTCCCCGGCGACTACGGCTGGGACACCGCCGGCCTGGCCGCGGACCCGGAGACCTTCAAGCGGTACCGCGAGCTCGAGCTCATCCATGCGCGGTGGGCCATGCTCGGCGCCCTCGGCTGCGTGACGCCCGAGATCCTCTCCAAGTACAACGGCGTCAAGTTCGGCGAGTCCGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270144.p2 GENE.S_Transcript_270144~~S_Transcript_270144.p2 ORF type:3prime_partial len:110 (+),score=-17.79,Chloroa_b-bind|PF00504.17|8.8e-23 S_Transcript_270144:65-391(+)
MLGSKIANRPVVGALAPSRGVAARAEWYGPDRAKWLGPLSENAVPSYLNGEFPGDYGWDTAGLAADPETFKRYRELELIHARWAMLGALGCVTPEILSKYNGVKFGESV

Click here to download the sequence:
Link to NCBI Protein BLAST