Transcript Information: S_Transcript_270147.p1


Annotated TAIR IDAT2G05070.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.2
Annotated Gene Symbol(s)LHCB2.2, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1799436-1800329 | Reverse length=265
E-Value1.6E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1916269209782
Replicate 22.0580960408129
Replicate 30.55052943533136
Condition 2: 8 Hour
Replicate 10.71615116736641
Replicate 20
Replicate 30.47722046876824
Condition 3: 24 Hour
Replicate 10
Replicate 22.2832944498559
Replicate 30.28233631796772


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270147.p1 GENE.S_Transcript_270147~~S_Transcript_270147.p1 ORF type:internal len:268 (+),score=-13.99,Chloroa_b-bind|PF00504.17|1.4e-46 S_Transcript_270147:1-801(+)
GTGCTATATTTGTGTAACGCTTTTACAAGCTCGGCCGCTGACGTAGACTCTGCAGCGCTCTGTGCTTGCTTCTGTGCAAAGCTTGAGGAAATGTTCGGCAACGCGCGATCCATCTCGTCCGTGACGAATGGCTCCAACGTCAACATGATGGCGCCAAAGAGCAAGGGCAAGACCAAGAAGAGTCCTAAGCCGGTGCAAGGCGCTCGCAAGACTGTGCGGGAGCGCGCAGGCTGGTGGGGCTCTGACAAGGGCTCCGGTCTGAACCAGTGGTATGGCCCCAATCGGGGCTTGTTCCTGGGCCCCCTCAGCGGCGATCCGCCGCCATACCTCAAGGGTGAGTTCGCCGGCGACTATGGCTGGGACACTGCGGGCCTGTCCGCCGACCCCGAGACCTTCCGCCGCTACCGCGAGCTCGAGCTCATCCACGCCCGGTGGGCGATGCTCGGCGCCCTCGGCTGCGTCACGCCCGAGATCCTGAGCCGCTACCAGGGCGTCAAGTTCGGCGAGTCTGTGTGGTTCAAGGCCGGTGCCCAGATCTTCCAGTCAGGCGGCCTCGACTACCTTGGCGACCCAGGCCTCATCCACGCGCAGTCCATCCTGTACGTGCTCGGCGCGCAGGTGGTGCTGATGGGCGTGATCGAGGGCTACCGTGTCAACGGTGGCCCCGCCGGCGAGGGCCTTGACCGCCTCTACCCCGGCGGAGACTTCTTCGATCCCCTCGGCCTCGCCGACGACCCCGACAGCTTCGCGGAGCTCAAGGTGAAGGAGATCAAGAACGGCCGCCTCGCCATGTTTGCCATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270147.p1 GENE.S_Transcript_270147~~S_Transcript_270147.p1 ORF type:internal len:268 (+),score=-13.99,Chloroa_b-bind|PF00504.17|1.4e-46 S_Transcript_270147:1-801(+)
VLYLCNAFTSSAADVDSAALCACFCAKLEEMFGNARSISSVTNGSNVNMMAPKSKGKTKKSPKPVQGARKTVRERAGWWGSDKGSGLNQWYGPNRGLFLGPLSGDPPPYLKGEFAGDYGWDTAGLSADPETFRRYRELELIHARWAMLGALGCVTPEILSRYQGVKFGESVWFKAGAQIFQSGGLDYLGDPGLIHAQSILYVLGAQVVLMGVIEGYRVNGGPAGEGLDRLYPGGDFFDPLGLADDPDSFAELKVKEIKNGRLAMFAM

Click here to download the sequence:
Link to NCBI Protein BLAST