Transcript Information: S_Transcript_270252.p1


Annotated TAIR IDAT1G55900.1
Annotated Gene NameHaloacid dehalogenase-like hydrolase (HAD) superfamily protein
Annotated Gene Symbol(s)TIM50, emb1860
Annotation TypeOrtholog
Chromosome Positionchr1:20903163-20905420 | Forward length=376
E-Value2.2E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3746126273003
Replicate 24.4556773699216
Replicate 34.4454803589135
Condition 2: 8 Hour
Replicate 15.0708582838785
Replicate 24.0079859126546
Replicate 33.8882327878793
Condition 3: 24 Hour
Replicate 12.9173948635647
Replicate 23.1005866000215
Replicate 34.2721378145474


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270252.p1 GENE.S_Transcript_270252~~S_Transcript_270252.p1 ORF type:5prime_partial len:307 (+),score=55.65,NIF|PF03031.14|1.3e-39 S_Transcript_270252:1-921(+)
GCTATTACTGGTGTTGCTGGTCTTGCTGGTTATGCTAGTTATGCATATACATTGGAAGAAGTAGACGAGAAGACAAAGGCCTTCCGAGCTTATGCAAATTACTCCACAGAAGATGATGAATCTGCTATTAATAAATTCCTATCTACTATGCGATATGGTGTTCTCACAGTGCCTGCCAAAGCAATTGAACTTTACCTAGATCTGAGGAGATCCATTGAGGAGCAAGTTCGTGGTTTCACCGAACCCTTGTCGGATAAGCTTCTTCCTGATTTGCCTCCAAATATGCAACACGTTTTTACACTTGTCCTGGATCTGAATGAGACTTTAGTCTACTCTGATTGGAAGCGTGAAAGGGGCTGGAGAACTTTTAAAAGGCCAGGTGTGGATGCCTTTCTGGAGCATCTAGCACAGTTTTATGAAATTGTTGTGTATTCTGACCACTTGAATATGTATGTCGACCCCGTTGTTGACAGATTGGATGAGAAACGTGCTGTTAGTTTTAGGTTATCAAGGTCTGCAACAAGATATCAGGATGGGAAACATTACAGGGACCTTTCGAAACTGAACCGTGATCCCACAAAGATTATCTATATAAGTGGCCATGCTCTAGAGAACTGCCTTCAGCCAGAAAACAGTATCGAGATCAAGCCATGGACAAGTGATGATGTGAATGATACCACTCTCGTGGATCTCATTCCATTTCTTGAATATGTTTCCCAGAGTATGCCACCTGATATTCGGAAGGTGCTCTCATCATATCAAGGGCGTGATGTTGCTAAGGAGTTCATAGAGCGCTCTAAAGACTATCAAAGCAGGCATTTTGCCGACCAGTTAAATTCTTTTTGCGATGTCAACCTAGAATGCGGAACAAGTGCTTTTTCACTTCATCAAATGAAGCCCACAATTTATTTGAGGCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270252.p1 GENE.S_Transcript_270252~~S_Transcript_270252.p1 ORF type:5prime_partial len:307 (+),score=55.65,NIF|PF03031.14|1.3e-39 S_Transcript_270252:1-921(+)
AITGVAGLAGYASYAYTLEEVDEKTKAFRAYANYSTEDDESAINKFLSTMRYGVLTVPAKAIELYLDLRRSIEEQVRGFTEPLSDKLLPDLPPNMQHVFTLVLDLNETLVYSDWKRERGWRTFKRPGVDAFLEHLAQFYEIVVYSDHLNMYVDPVVDRLDEKRAVSFRLSRSATRYQDGKHYRDLSKLNRDPTKIIYISGHALENCLQPENSIEIKPWTSDDVNDTTLVDLIPFLEYVSQSMPPDIRKVLSSYQGRDVAKEFIERSKDYQSRHFADQLNSFCDVNLECGTSAFSLHQMKPTIYLRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST