Transcript Information: S_Transcript_270254.p1


Annotated TAIR IDAT1G55900.1
Annotated Gene NameHaloacid dehalogenase-like hydrolase (HAD) superfamily protein
Annotated Gene Symbol(s)TIM50, emb1860
Annotation TypeOrtholog
Chromosome Positionchr1:20903163-20905420 | Forward length=376
E-Value5E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9723832735751
Replicate 26.5558003256615
Replicate 35.4801272934127
Condition 2: 8 Hour
Replicate 17.4334217676864
Replicate 27.4146698348808
Replicate 35.6030227990237
Condition 3: 24 Hour
Replicate 15.8669115660453
Replicate 26.4753747360993
Replicate 35.1885348490525


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270254.p1 GENE.S_Transcript_270254~~S_Transcript_270254.p1 ORF type:5prime_partial len:175 (-),score=26.97,NIF|PF03031.14|1.9e-32 S_Transcript_270254:191-715(-)
CCGATCTGGAAGCGTGAAAGGGGCTGGAGAACTTTTAAAAGGCCAGGTGTGGATGCCTTTCTGGAGCATCTAGCACAGTTTTATGAAATTGTTGTGTATTCTGACCACTTGAATATGTATGTCGATCCCGTTGTTGACAGATTGGATGAGAAACGTGCTGTTAGTTTTAGGTTATCAAGGTCTGCAACAAGATATCAGGATGGGAAACATTACAGGGACCTTTCGAAACTGAACCGTGATCCCACAAAGATTATCTATATAAGTGGCCATGCTCTAGAGAACTGCCTTCAGCCAGAAAACAGTATCGAGATCAAGCCATGGACAAGTGATGATTTGAGTGATACCACTCTCGTGGATCTCATTCCATTTCTTGAATATGTTGCCCAGAGTATGCCACCTGATATTCGGAAGGTGCTCTCATCATATCAAGGGCGTGATGTTGCTAAGGAGTTCATAGAGCGCTCTAAAGACTTTCAAAGGCGTAAGCAGGAACAGAAACAGCACGGACGTTTCTGGCGACGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270254.p1 GENE.S_Transcript_270254~~S_Transcript_270254.p1 ORF type:5prime_partial len:175 (-),score=26.97,NIF|PF03031.14|1.9e-32 S_Transcript_270254:191-715(-)
PIWKRERGWRTFKRPGVDAFLEHLAQFYEIVVYSDHLNMYVDPVVDRLDEKRAVSFRLSRSATRYQDGKHYRDLSKLNRDPTKIIYISGHALENCLQPENSIEIKPWTSDDLSDTTLVDLIPFLEYVAQSMPPDIRKVLSSYQGRDVAKEFIERSKDFQRRKQEQKQHGRFWRR*

Click here to download the sequence:
Link to NCBI Protein BLAST