Transcript Information: S_Transcript_270335.p1


Annotated TAIR IDAT4G37890.1
Annotated Gene NameZinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)EDA40
Annotation TypeOrtholog
Chromosome Positionchr4:17812812-17815031 | Reverse length=739
E-Value3E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.92836050820397
Replicate 20.25654406462226
Replicate 30
Condition 2: 8 Hour
Replicate 10.99187861940153
Replicate 20.26013777488054
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270335.p1 GENE.S_Transcript_270335~~S_Transcript_270335.p1 ORF type:internal len:86 (+),score=7.26,zf-RING_11|PF17123.1|1e-07,zf-RING_11|PF17123.1|2.6e+03,zf-RING_2|PF13639.2|7.9e-07,zf-C3HC4|PF00097.21|5.5e-06 S_Transcript_270335:2-256(+)
AACACCCTCCGCCTCTCCAAGGTCACTCGGTGTGGCGTTTGTGCTCATAATGTTAAGTCAGCTCAAGGCACCGCCATCTTCACCGCTGAATGCTCCCACTCTTTTCACTTCCCTTGTATTGCTTCCTACGCTGCTAAGACCAGCACCACCAATGGCGTGTCTCTGCATACGTGTCCTCTCTGCGGGGCCCACTGGAAGGAGGCTCCACTCCTTGCTGTCCCCACTACTGTCGTCAAGAAGAAATCTCCGCCGTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270335.p1 GENE.S_Transcript_270335~~S_Transcript_270335.p1 ORF type:internal len:86 (+),score=7.26,zf-RING_11|PF17123.1|1e-07,zf-RING_11|PF17123.1|2.6e+03,zf-RING_2|PF13639.2|7.9e-07,zf-C3HC4|PF00097.21|5.5e-06 S_Transcript_270335:2-256(+)
NTLRLSKVTRCGVCAHNVKSAQGTAIFTAECSHSFHFPCIASYAAKTSTTNGVSLHTCPLCGAHWKEAPLLAVPTTVVKKKSPPS

Click here to download the sequence:
Link to NCBI Protein BLAST