Transcript Information: S_Transcript_270341.p1


Annotated TAIR IDAT4G37890.1
Annotated Gene NameZinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)EDA40
Annotation TypeOrtholog
Chromosome Positionchr4:17812812-17815031 | Reverse length=739
E-Value6.1E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3781670555198
Replicate 27.3856916609914
Replicate 35.6484163219005
Condition 2: 8 Hour
Replicate 126.823817165283
Replicate 226.291702461217
Replicate 325.597235799144
Condition 3: 24 Hour
Replicate 13.7341681180503
Replicate 23.8095865612664
Replicate 34.7426066402782


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270341.p1 GENE.S_Transcript_270341~~S_Transcript_270341.p1 ORF type:complete len:702 (-),score=44.02,VWA_3|PF13768.2|4.4e-13,VWA_3|PF13768.2|9.2e+03,VWA_2|PF13519.2|1.3e-10,VWA|PF00092.24|2.4e-10,zf-RING_11|PF17123.1|6e-07,zf-RING_2|PF13639.2|1.6e-05 S_Transcript_270341:543-2615(-)
ATGGTGACGGGATGGCGAAGAGCCTTCTGCACCTCCATTCCCAAAGACCACCAACCCAAAATCGCCACCTCTGACAAAAAACCCACCCACACTAACACCAGAAACACAGGTCGGAGCCCCAGATTCGGACCCAAATTCAGCTTCTTCTCCACCTCCTCCTCAACTAGTACTAGCACCAGTCAAACCTCAACCCCTCGTACTCCAATCTCCACAGAACTCCATTGTAAACCAACTACCCAAAATTCTTCTTCTTCTTCTAAGGTTTTGTTACAATGCTCTTCAACAACACCATCATCACCTCGTTCACCATCCACTTTCTCTCTCCTCAAGAACACCCTCCGCCTCTCCAAGGTCACTCGGTGTGGCGTTTGTGCTCATAATGTCAAGTCAGGTCAAGGCACCGCCATCTTCACCGCTGAATGCTCCCACTCCTTTCACTTCCCTTGTATCACTTCCTACGCTGCTAAGAACAACACCAATGGTGTTTCTCTGCATACGTGTCCTCTCTGCGGGGCCCACTGGAAGGAGGCTCCTCTCCTTGCTGTCCCCACTACTGTCGTCAAGAAGAAATCTCCGCCGTCCGATCTCCGACTCTACGACGACGACGAGCCCTTGATGTCTCCGGTTTCCGGAATCCGGTTCAACCCGATTCCTGAGTCCGAAGAAGAAGCTGAAACCGATACCGACACAGATACGGAGTTCCCCGGATTCTTCTCTGATCCGGTGACACCTCGCCGTAATTACATCAACGAATTCGCGAACTTCAAAGGAGTCGAAGTCAGAATCTCGCCGGAAGCGGCCGTCGTCTCCGTCGGCCGGAGTTACGAGACCTACGCGGTTCTTCTCACAATCAAATCCCCGCCGGCACCGGTTGGTTCTAGACGGACGTCGGTGGACCTCGTGACGGTGCTCGACATCGGAGGTGACATGACCCCGGCGAAACTAATGGCAATGAAGAGAGCAATGAGAGCGGTGGTATCTTCTCTCTCATCCAACGACCGTCTCTCAATTGTGGCCTTCTCATCAGGGTCAAAACGCCTTCTTCCATTAAGAAGAATGACTCCTTCGGGGAGACGATCGGCGAGGAGGATAATCGAAACGCTAAACTTGGGTCAAGGATCTTGCCTAAACGACGCGTTGAGGAAGGCTGCGAAAGTGCTTCAAGATCGTAAAGAGAAGAATCATTTCGCCAGTATAATCTTGCTTGACGGCCAGAGTCACCATCAAAACCAAACCCATCAATTTGAGGTTGTGTCATCCACGCGCTTCTCACACCTAGAAATCCCAGTCCACACTTACAGAGTCGGAGAGGACATAAACGACGACGTTTTTATAAAGTCAGTAAACAGCTTCCTAAGCGTCGTCGTTTTGGATCTCCGAATCCAGCTCGGATTAGCATCCGGTTCAGCTCCGGCCGAGATAGCAGCGGTTTACTCCTGCACGGGACGGCCGGGGTTACTGAGTCAGGCGTTATCGAAAATCGGGAATATGTACAGCGAGGAGGAGAGAGAAATGTTGATAGAGTTGAAAGTTCCAGCAGCTTCGATTGGGTGTAACCACTTGATCTCCGTACGATCATACCACAAGGAGCCAACCACAAATCAGATGGTGTACGGGAGGGAACAATCAGTGATAGTGCCACGTCCTCACACCATCCGATCGTCGGATCCCAGCATCCAACGGCTGAGAAGCTTGTTTGTGATGACACGAGCTGTGGCTGAGAGCAGGAGATTATTAACGGAACGGAATGATTTGAGTGGGGCCGAGAGGCTCCTGGGGTCGGCTAGAGCCGTGTTGGGCCAGCCGAGCTTGAAGATTCAAGCCGCTGATGAGTATCGCAGGAGAGTCGAGGCTGAGCTGGCGGAGGTCAGGTGGCGGCGACAGGAGGAGAAGTGGAGGAGAGAGAAGGATGGTGGTGGTGGTGGTGGGTGTTGTATTGTGGATGAGAAAGGAGAGCCGTTAACGCCGACATCGGCTTGGAAAGCGGCTGAGCGGCTGGCTAAAGTCGCCATGATGAGGAAGTCGTTGAATCGTGTCAGCGACTTGCACGGCTTCGAAGACGCTCGCTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270341.p1 GENE.S_Transcript_270341~~S_Transcript_270341.p1 ORF type:complete len:702 (-),score=44.02,VWA_3|PF13768.2|4.4e-13,VWA_3|PF13768.2|9.2e+03,VWA_2|PF13519.2|1.3e-10,VWA|PF00092.24|2.4e-10,zf-RING_11|PF17123.1|6e-07,zf-RING_2|PF13639.2|1.6e-05 S_Transcript_270341:543-2615(-)
MVTGWRRAFCTSIPKDHQPKIATSDKKPTHTNTRNTGRSPRFGPKFSFFSTSSSTSTSTSQTSTPRTPISTELHCKPTTQNSSSSSKVLLQCSSTTPSSPRSPSTFSLLKNTLRLSKVTRCGVCAHNVKSGQGTAIFTAECSHSFHFPCITSYAAKNNTNGVSLHTCPLCGAHWKEAPLLAVPTTVVKKKSPPSDLRLYDDDEPLMSPVSGIRFNPIPESEEEAETDTDTDTEFPGFFSDPVTPRRNYINEFANFKGVEVRISPEAAVVSVGRSYETYAVLLTIKSPPAPVGSRRTSVDLVTVLDIGGDMTPAKLMAMKRAMRAVVSSLSSNDRLSIVAFSSGSKRLLPLRRMTPSGRRSARRIIETLNLGQGSCLNDALRKAAKVLQDRKEKNHFASIILLDGQSHHQNQTHQFEVVSSTRFSHLEIPVHTYRVGEDINDDVFIKSVNSFLSVVVLDLRIQLGLASGSAPAEIAAVYSCTGRPGLLSQALSKIGNMYSEEEREMLIELKVPAASIGCNHLISVRSYHKEPTTNQMVYGREQSVIVPRPHTIRSSDPSIQRLRSLFVMTRAVAESRRLLTERNDLSGAERLLGSARAVLGQPSLKIQAADEYRRRVEAELAEVRWRRQEEKWRREKDGGGGGGCCIVDEKGEPLTPTSAWKAAERLAKVAMMRKSLNRVSDLHGFEDARF*

Click here to download the sequence:
Link to NCBI Protein BLAST