Transcript Information: S_Transcript_270599.p1


Annotated TAIR IDAT1G62720.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23227574-23229031 | Forward length=485
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48387274973055
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.58160155410363
Replicate 21.6270435374347
Replicate 30.38756086554511
Condition 3: 24 Hour
Replicate 10.99294924957246
Replicate 21.2362079041644
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270599.p1 GENE.S_Transcript_270599~~S_Transcript_270599.p1 ORF type:5prime_partial len:110 (+),score=26.02,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|1.1e+02,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|2.2e-06 S_Transcript_270599:1-330(+)
TGTCTTCTCCAAGATGATGTACAAGGGGTTGCTGCCAAATTGTACAATTCACACTGCAATGATCAAAGGGCTTTGAAAGAAAGGGCTCTTAAGGCTGATCAACTATTGCAGAAGATGGAAGAGCATGGCTGTTTACCAGATGCTGTTACCTACAATACACTTATCAGGGGGTTCCAAAAAATCACAAAAGGCCTGCAGCTTATTAATGTTATGACTAGCAGAGGTTTCGAAGCTGATGCTGAATCTTCATTTCTATTCCTTGACTTGCTTTCAGACGATTGTGTAGACAAGTCAGTCAAGGAGCAGCTTCAAAAATTACTCAAGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270599.p1 GENE.S_Transcript_270599~~S_Transcript_270599.p1 ORF type:5prime_partial len:110 (+),score=26.02,PPR_2|PF13041.2|4e-08,PPR_2|PF13041.2|1.1e+02,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|2.2e-06 S_Transcript_270599:1-330(+)
CLLQDDVQGVAAKLYNSHCNDQRALKERALKADQLLQKMEEHGCLPDAVTYNTLIRGFQKITKGLQLINVMTSRGFEADAESSFLFLDLLSDDCVDKSVKEQLQKLLKE*

Click here to download the sequence:
Link to NCBI Protein BLAST