Transcript Information: S_Transcript_27062.p2


Annotated TAIR IDAT2G39440.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit C (InterPro:IPR013924); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16468220-16469113 | Reverse length=162
E-Value5E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4109946798642
Replicate 22.8035588940488
Replicate 34.3814234894742
Condition 2: 8 Hour
Replicate 14.5949736042441
Replicate 24.9440549480059
Replicate 33.8863147567093
Condition 3: 24 Hour
Replicate 15.5517383456759
Replicate 24.2572905723525
Replicate 34.7378425954362


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27062.p2 GENE.S_Transcript_27062~~S_Transcript_27062.p2 ORF type:complete len:181 (+),score=38.07,RNase_H2_suC|PF08615.7|4.1e-22 S_Transcript_27062:97-639(+)
ATGGAGGAAAGAAATGGTAGAACGATAGGCTGCACAGGAACAATAAATTTCTGTCAATCTCCAAGCTCAGCAGAAGAAGGTGCTGTGGATTTAACTGGACATGTCCACCGCCTTCCTTGTTGCGTCAAATTCAATGGCTCCTCCAATGTCTCCCACTATTTTAAGCCCAAATCTACTGGTATTAAGGTGGATGGCTTAGCAGTAGAGGAAGCTTTCTTTAGGGGTAGGAAATTGGAGGGCGTTACAGTTCCATTGCCCGAGGGTTATTCTGGTTTTATTCTGGGAAAGAAGGACCTTAGTAAGGATAAAGCTAGGAAAACTGTTGGTAGAAATACACGTCCTGAAACATCCAGTGGTAATGAAAATAGTTGGGATATCTCTCTCAAAAAAAAAGAAAATAGTTGGGATATGCTGGCCAAATGTGGGAAATTGACATTTTGGAACCATGATAGTCAATCTTCTCAAGATGATGCCTCTGTGCGCTTGTTTCACTGGTTTGCTGTTGCCAAGGTGGTAAGTTCATTGTCTGGCATCTCTAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27062.p2 GENE.S_Transcript_27062~~S_Transcript_27062.p2 ORF type:complete len:181 (+),score=38.07,RNase_H2_suC|PF08615.7|4.1e-22 S_Transcript_27062:97-639(+)
MEERNGRTIGCTGTINFCQSPSSAEEGAVDLTGHVHRLPCCVKFNGSSNVSHYFKPKSTGIKVDGLAVEEAFFRGRKLEGVTVPLPEGYSGFILGKKDLSKDKARKTVGRNTRPETSSGNENSWDISLKKKENSWDMLAKCGKLTFWNHDSQSSQDDASVRLFHWFAVAKVVSSLSGISK*

Click here to download the sequence:
Link to NCBI Protein BLAST