Transcript Information: S_Transcript_270670.p1


Annotated TAIR IDAT5G58440.1
Annotated Gene Namesorting nexin 2A
Annotated Gene Symbol(s)SNX2a
Annotation TypeOrtholog
Chromosome Positionchr5:23624154-23626676 | Reverse length=587
E-Value3.1E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4747524200746
Replicate 25.2065580076731
Replicate 34.8963016151152
Condition 2: 8 Hour
Replicate 14.2147526585484
Replicate 25.3454859581648
Replicate 34.4643810618102
Condition 3: 24 Hour
Replicate 14.8329388253527
Replicate 24.1450038871196
Replicate 36.8449206055182


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270670.p1 GENE.S_Transcript_270670~~S_Transcript_270670.p1 ORF type:internal len:339 (-),score=75.55,PX|PF00787.20|1.2e-20 S_Transcript_270670:1-1014(-)
GGGGATTCCAATGGTTTCAACAGCCCTAACTCGGACTCAGTGGCCTCAAATAACGCACTAGGATCTGATTATTTGCAGATCAGTGTTTCAAACCCTCAGAAAGAGCATGAGGGTTCGTCTAATTCGATTGTTCCAGGGGGTAACACTTATGTGACATATTTGATCACTACGTGGACGAATATGAGGGGTTTTGGTGGTCCTGAGTTTAGTGTTAGGAGGAGGTTCAGGGATGTGGTTACGCTGGCTGATAGGTTATCGGAGTCGTATAGAGGGTTTTTCATTCCGGCTAGGCCTGATAAGAGTGTGGTGGAGAGTCAAGTCATGCACAAGCAGGACTTTGTTGAGCAAAGGAGAGTCGCCTTGGAGAAGTACTTGCGGAAATTGGCAGCTCATCCTGTGATTAGGAAAAGCGATGAGTTGAGAGTGTTTTTGCAAGTGCCTGGGAAGCTTCCTTTGCCTATGAGCACTGATGTGGCATCAAGGGTGCTTGATGGAGCCGCCAAGTTACCAAAGCAGTTGTTTGGGGACTCTAGGAGTGTTGTAGCTCCTCAAGAGGCAGTCCAACCAGCGAAAGGAGGAAGAGATCTGCTGAGGCTATTCAAGGAGCTGAAACAGTCCGTGACAAATGATTGGGGAAATTCAAGGCCACCACTTGTTGAAGAGGACAAGGAGTTTTTGGAGAAGAAAGAAAAGCTACATGATTTTGAGCTGCGTCTCACTGATGCATCTAAGCAGGCAGAGGTGCTCATCAAAGCTCAACAAGATATGGGAGATACAATGGGAGAATTGGGGCTATCATTTATCAAGTTGACAAAATTTGAGAATGAGAAAGTTCTTCTCGACACTCAAAAAGCACGTGCTGCTGACATGAAGAACATAGCAACAGCTACTATCAAAACAAGCAGAATAGAGGGAACTAAATGCAAAAACAGTAAAAGACCTGGCATTTCCAGAAAAGCTTTTTTTTTTTTTTTTTATGATCTGTCATTTATTTACTATACGTCTTTTTACCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270670.p1 GENE.S_Transcript_270670~~S_Transcript_270670.p1 ORF type:internal len:339 (-),score=75.55,PX|PF00787.20|1.2e-20 S_Transcript_270670:1-1014(-)
GDSNGFNSPNSDSVASNNALGSDYLQISVSNPQKEHEGSSNSIVPGGNTYVTYLITTWTNMRGFGGPEFSVRRRFRDVVTLADRLSESYRGFFIPARPDKSVVESQVMHKQDFVEQRRVALEKYLRKLAAHPVIRKSDELRVFLQVPGKLPLPMSTDVASRVLDGAAKLPKQLFGDSRSVVAPQEAVQPAKGGRDLLRLFKELKQSVTNDWGNSRPPLVEEDKEFLEKKEKLHDFELRLTDASKQAEVLIKAQQDMGDTMGELGLSFIKLTKFENEKVLLDTQKARAADMKNIATATIKTSRIEGTKCKNSKRPGISRKAFFFFFYDLSFIYYTSFYH

Click here to download the sequence:
Link to NCBI Protein BLAST