Transcript Information: S_Transcript_270845.p1


Annotated TAIR IDAT5G05810.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL43
Annotation TypeOrtholog
Chromosome Positionchr5:1746938-1747999 | Forward length=353
E-Value5.9E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1290400988144
Replicate 20.93766855619438
Replicate 30.69160260313502
Condition 2: 8 Hour
Replicate 10.79970213689249
Replicate 20.72708508079112
Replicate 30.74605466617435
Condition 3: 24 Hour
Replicate 10.43689766981188
Replicate 20.56659528940868
Replicate 30.50444088810232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270845.p1 GENE.S_Transcript_270845~~S_Transcript_270845.p1 ORF type:complete len:400 (+),score=25.48,zf-RING_2|PF13639.2|1.3e-13,zf-RING_11|PF17123.1|8.1e-11,zf-rbx1|PF12678.3|1.2e-07,zf-rbx1|PF12678.3|7.9e+03,zf-C3HC4|PF00097.21|1.5e-06,zf-C3HC4_2|PF13923.2|6.2e-06 S_Transcript_270845:165-1364(+)
ATGTCATCACTACTATTCTTAATCCTCTTCTTGACGTCATCATCCCACGTCAGCTCGCGGCCACTCTCGCCGGAAAACCCACCGGACCAACCGCCGCCGCCGAGCTACTCCCCCTTCAAGCCAAGCATTGCCGTCATTGTCGCCATCCTCGCCACCATCTTCTCCATCACCTTCCTCCTCCTCATGTACGCCAAGCACTGCAAAGGAGGGGGACCCTTTATGTCGTCGTTGAGAAGAAACGGGTCGGGTTTTGATCCGGGTGGGTATTACAACAACCACCCGCGTACGGAGAGGAAGAACTCCGGGATTGACCCTCTTGTGATTGAGTCATTGCCGGTCTTCCGGTTCGGGGCGCTGAGGGGCGGGCAGAAGGAGGGGTTGGAGTGCGCGGTTTGTTTAAACCGGTTTGAACCGGCTGAGGTGTTGCGGTTGTTGCCTAAGTGTAAGCATGCTTTCCACGTGGAATGTGTTGACACGTGGCTTGACGCTCATTCCACTTGCCCGCTTTGCCGGTTCAGGGTTGACCCCGAGGACGTTCTTTTAGTCGACCGGTGGAGCGCGGTCGAGCCGGATGAGGAGAGCCAACTCGGTGGTTCTGAGTCGACTCACCGGGTCTCCGGGCGCCACTCGTCCGCTTTTGAGAGAGGCAATAACATCAGGCATGAAACGACGACGTCGTGGTGCAGGAGATCGTGTGATGGGATGATGGAGGAAATGTCAGCCGTTAGAAAAGACGGGCTTCTAATCACAGCCGTTGATAAGAACATGAACATCTCAGCAGGAGAGAGAAAAGTGGATCACAGGAGGATTATCATCACAACTGACCCAGCTGGACCCCACCAGAGATGGAGCGACGTACAGCCGTGTGATCTGTTCTATTTTCGGACAAAAATGGTGATGAGAAACGAGGGCCGTCGATCTTCGTCGTCATCGAAGCAGGTGCACGAGAATCAGCATAGGGTGCGACTACAGCAGAACAACATTAGTAGTAGTGAGGGGGATGGCAGGAGTGTAATTAACGGGAGAAGTGTGTCGGAAATCACGGGGCTAAGCAGGTTGGCAGAAGGAATAGTAGTAGAAGGAAGTGAGAGTAGGAGAGTTGAGGAGAGAGAAAGACAAAGACAAACACATACTGGGGCTGTCTCCAGGTGGATGGCTTGGATTTCTCAGCCTCCGCCAGCTGTACAAGCTCAAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270845.p1 GENE.S_Transcript_270845~~S_Transcript_270845.p1 ORF type:complete len:400 (+),score=25.48,zf-RING_2|PF13639.2|1.3e-13,zf-RING_11|PF17123.1|8.1e-11,zf-rbx1|PF12678.3|1.2e-07,zf-rbx1|PF12678.3|7.9e+03,zf-C3HC4|PF00097.21|1.5e-06,zf-C3HC4_2|PF13923.2|6.2e-06 S_Transcript_270845:165-1364(+)
MSSLLFLILFLTSSSHVSSRPLSPENPPDQPPPPSYSPFKPSIAVIVAILATIFSITFLLLMYAKHCKGGGPFMSSLRRNGSGFDPGGYYNNHPRTERKNSGIDPLVIESLPVFRFGALRGGQKEGLECAVCLNRFEPAEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRFRVDPEDVLLVDRWSAVEPDEESQLGGSESTHRVSGRHSSAFERGNNIRHETTTSWCRRSCDGMMEEMSAVRKDGLLITAVDKNMNISAGERKVDHRRIIITTDPAGPHQRWSDVQPCDLFYFRTKMVMRNEGRRSSSSSKQVHENQHRVRLQQNNISSSEGDGRSVINGRSVSEITGLSRLAEGIVVEGSESRRVEERERQRQTHTGAVSRWMAWISQPPPAVQAQA*

Click here to download the sequence:
Link to NCBI Protein BLAST