Transcript Information: S_Transcript_270862.p1


Annotated TAIR IDAT4G23500.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12264640-12267074 | Forward length=495
E-Value3.4E-213
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.567210164079
Replicate 210.448340086434
Replicate 34.9518551429541
Condition 2: 8 Hour
Replicate 16.9882357276017
Replicate 26.7635821468941
Replicate 312.888652040221
Condition 3: 24 Hour
Replicate 15.8653281253815
Replicate 29.3434318338007
Replicate 311.037977149808


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_270862.p1 GENE.S_Transcript_270862~~S_Transcript_270862.p1 ORF type:complete len:473 (+),score=56.87,Glyco_hydro_28|PF00295.13|8.9e-38,Pectate_lyase_3|PF12708.3|1.9e-10 S_Transcript_270862:125-1543(+)
ATGAAATCATGCCACATGTTGGCAATGGGGTTACTCTTACTAAGTAATTTTCTAACGGAAACTGAAGGGCGACATAATGGTGGTAAAAGTTTGGTAAATATGGAATACAGAGCGGTTAGCTGTAGAAAGCACAGTGCATTGGTAACAGAATATGGGGCCAAAGGAGATGGCAAGACTTTAAACACAAATATTTTCAAATCAGCGATCAAACACCTAAGCAAGTTAGCCCCAGACGGTGGGGCCCAGCTGATAATACCGCCGGGCAGGTGGTTAACCGGGAGTTTTTCTCTCATCAGTCACTTCACTCTGTATCTCCACAAGGATGCCGTTCTTCTTGCTTCTCAGGATGAGAAAGACTATCCAATACTTCCACCTTTGCCATCATATGGTAAAGGCAGAGACGCCCCTGCTGGCCGTTATGCTAGTCTCATCTTCGGAACCAACCTTACTGATGTGATCATTACAGGTAACAATGGGACGATTGATGGGCAGGGGGAACCTTGGTGGAAGAAATACAAGAGTAATCAGCTTACTGAAACCAGGCCTTACATGATTGAGCTTATGTACTCTAATGGAATCCAAATCTCTGATCTCACCTTGCTTGATTCCCCTAATTGGAATGTTCATCCAATCTATTGCAGGGATGTCATTATCCAAGGGCTGACCATCCTTGCACCAACTCATTCTGCTAACACTGATGGGATTGATCCAGATTCATGCACAAATGTTCGGATAGAGAACAATTACATAGTCTCAGGGGATGACTGCATAGCAATCAAGAGTGGGTGGGATGAGTATGGCATTCGCTTCAACATGCCCACCCAAGACGTGGTCATCCGTCACCTCACGTGCATCTCTCCGACAAGCGCCACCATCGCGATCGGAAGTGAGATGTCGGGTGGGATACGGAACATCCGAGCTGAGCACATAACGGCCATCAACACTGAGTCAGGGGTTCGAGTCAAGTCCTCCCCAGGCCGAGGGGCCTTTGTTAAGGACATCTATGTAAGGAGGATGACTATGAAGACAATGAAGTATGTGTTTTGGATGACTGGGTATTATGGATCCGAAAGAGTCCACCCGGATCTGAACTACAACCCGAAGGCCCTACCCGTGATCGAGGGGATCAACTATAGGGACATGGTGGCGGAGAATGTAAGCATGGCAGGGTATATGGAAGGGATAAAGGGAGATGAGTTCAAGGGGATATGCATATCAAATGTGACAATTGGGCTGGCCCCAAAGCCCAAGGAGATGCAATGGAATTGTACCAATGTTGAAGGGATTACGAGCAGGGTTAGTCCTAGGGCTTGTGGAAGGCTAAGGGAAGCCAATGTTGTGGGGTGCCCCTTCCCTGAGGATAGGTTGCCTATTGAACAAGTGCAGCTTAGAGTTTGCATGGTTCCTTCTCTTGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_270862.p1 GENE.S_Transcript_270862~~S_Transcript_270862.p1 ORF type:complete len:473 (+),score=56.87,Glyco_hydro_28|PF00295.13|8.9e-38,Pectate_lyase_3|PF12708.3|1.9e-10 S_Transcript_270862:125-1543(+)
MKSCHMLAMGLLLLSNFLTETEGRHNGGKSLVNMEYRAVSCRKHSALVTEYGAKGDGKTLNTNIFKSAIKHLSKLAPDGGAQLIIPPGRWLTGSFSLISHFTLYLHKDAVLLASQDEKDYPILPPLPSYGKGRDAPAGRYASLIFGTNLTDVIITGNNGTIDGQGEPWWKKYKSNQLTETRPYMIELMYSNGIQISDLTLLDSPNWNVHPIYCRDVIIQGLTILAPTHSANTDGIDPDSCTNVRIENNYIVSGDDCIAIKSGWDEYGIRFNMPTQDVVIRHLTCISPTSATIAIGSEMSGGIRNIRAEHITAINTESGVRVKSSPGRGAFVKDIYVRRMTMKTMKYVFWMTGYYGSERVHPDLNYNPKALPVIEGINYRDMVAENVSMAGYMEGIKGDEFKGICISNVTIGLAPKPKEMQWNCTNVEGITSRVSPRACGRLREANVVGCPFPEDRLPIEQVQLRVCMVPSLA*

Click here to download the sequence:
Link to NCBI Protein BLAST