Transcript Information: S_Transcript_271529.p1


Annotated TAIR IDAT3G54500.3
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20175792-20178482 | Reverse length=669
E-Value5E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.348170814435
Replicate 234.169668506903
Replicate 341.868606986447
Condition 2: 8 Hour
Replicate 18.6133192088699
Replicate 27.8519580183999
Replicate 39.321972350925
Condition 3: 24 Hour
Replicate 144.17656104226
Replicate 240.782234758553
Replicate 325.503069969518


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_271529.p1 GENE.S_Transcript_271529~~S_Transcript_271529.p1 ORF type:3prime_partial len:359 (-),score=88.01 S_Transcript_271529:2-1075(-)
ATGTTTGATTGGGACGACCAAGAGCTAGCAAACATAATATGGGGTGAGAGTAGTGTGGCTGATGATCATATTGTGCCTTATCCTGAAGATGTCGACAAAAAGGATCTGCCAGATTATGTGGATAATAATGATGTAAAGAAGTTGAATGGGGAAGGTATACAAAGCAAAGCTGAAGAACAACGCACTGCTGCTTCAAAGTCAATTTCAGATGGGGATAAAGAAGAGAAAAATGATGGCCTTTCTGCTTCAGGAGCTATAGTCGATCCTCAACTTGGTTTGTCTTCATTTGCTGCTCCAAAAACTATCAACAAAGCCATAGATAAGGGAAATCAGCTGAATATTGGTCCCGAGATATCCCAAAATCAGCATGATGACAAGGAGCTAGGTGAACTTGTTGGCAACAGCTGGGCTAATATTGGAAGTTTTGATGATCTCGATCGCATATTCAGCCATAAGGACTTGGATGGCCAGACTAGTCTTGGTAGTGCAGATGATTTATGGACATCATCTAAAGGCTTGATCAGTGAGGAAGCTAAGTCCTCCTCCCAAGCTTTGAGTTCAACAAGTTGGGAACTTGGAGCGCTAGGAAACAAATCTGCTCACTTTCAGATCAGTTCCGAGTATCTGCATCATGACAACAACTCTTTATCACAAGGCTGTCAAAAGACAGATGCCATTTCATTCTCCGAACAGATTATTGGTAGACGCGTGGAACAAGAAGAATATGCTGCGGGTACAACAAGCTTGGTCAAGGAAAAGAGAGCTCCAGGCATCACTGTGAATACGTCATTGGATCCTCACCTTGCTTCTGAAAATATTACAAACAAAAACAAGCTAGGAGATAAGGTGAATTGGTCCAAGAATCAATTAAAACACGTCCAGAGAACTGAGAAGGTAACTGATTCTAGACTCGTACGGGATACATATGACACATGGCCATCTGCTGCAAATGTTCCAAAATTTGACGACCAATGTGCCCCAGCCACTGTACAAAATTATCCAGCTTCTGGCTCCAGTCAAAAACAGCTGCCACAAGACTCAAGTTCTATGGCATACCAGCCTTTTTCAAATCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_271529.p1 GENE.S_Transcript_271529~~S_Transcript_271529.p1 ORF type:3prime_partial len:359 (-),score=88.01 S_Transcript_271529:2-1075(-)
MFDWDDQELANIIWGESSVADDHIVPYPEDVDKKDLPDYVDNNDVKKLNGEGIQSKAEEQRTAASKSISDGDKEEKNDGLSASGAIVDPQLGLSSFAAPKTINKAIDKGNQLNIGPEISQNQHDDKELGELVGNSWANIGSFDDLDRIFSHKDLDGQTSLGSADDLWTSSKGLISEEAKSSSQALSSTSWELGALGNKSAHFQISSEYLHHDNNSLSQGCQKTDAISFSEQIIGRRVEQEEYAAGTTSLVKEKRAPGITVNTSLDPHLASENITNKNKLGDKVNWSKNQLKHVQRTEKVTDSRLVRDTYDTWPSAANVPKFDDQCAPATVQNYPASGSSQKQLPQDSSSMAYQPFSNP

Click here to download the sequence:
Link to NCBI Protein BLAST