Transcript Information: S_Transcript_271777.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.033243588093
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.88082014896617
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.41689329595233


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_271777.p1 GENE.S_Transcript_271777~~S_Transcript_271777.p1 ORF type:internal len:363 (+),score=46.73,zf-RVT|PF13966.2|9.7e-18,zf-RVT|PF13966.2|1.3e+04 S_Transcript_271777:1-1086(+)
GGAGGGTCCACGTTTCCCATTGCAAGGTTTCTGTGGAAGGCAAAAGCCCCCCTCAAGGTGAGGGCGTTTGTTTGGACCTTGACCTTGGGAAAGCTTAACACCAATGATATGCACCAACGTAGGCGGCCTCAGTGGTGCCTCTCGCCTGATATTTGTCTTTTGTGCCACAAGAGTGGGGAGACAGCTGCTCACCTCTTTCTCTATTGTCCGGTCGCACGTTCTGTTTGGGCCTTGCTCTTTGGAGTCAGGAGGGAAGCCTTTGTTTGCCCGTCTACTGTGTTGGAGTTCCTGGAGATACGCTTCTGGGGGTTTGGTAGAGATAAGGAGTTGGGGGTGTTATGGCGTAATGCTATCTTTGCTACTTTGTGGTGTATCTGGTTGGAGCGCAATGCTAGGGTGTTTCAACAGCGCGCTCTCCCTATCTCTCTCTTGTGGGATCGGATCACCTACTTAGCCTCCTTGTGGAGTAAAGCAAGTGGGATGTTAGCTATTCTTTATCTGATGTACAACGGAATTGGGCTTGTTTGTAATTGGGAAGACATCTTGTCCTCTCTCTTGTACCTCATTTTAATCAATAAAATTTTTTCTTATCAAAAAAAAAAAAATCATGCAGTAGTTCCTGCACGGGGCCATTCCTCTGTAGCTCTTGCCTCAAGCCCGACGCCCAGGTCTCACCATATGAGCCCTCTTGCACCAAATGTGGGATTGCAGCAGGTTAGGAGTGCTATTCGTGCCCCAGCCCCTCACATGCCAGCCTTCCTATCTTCTTCAACACCTGTATCTTCTACTAGCAATATGGCTTCCGTCTCATGTGGTGCTTTGGGCCAGCCACCACCTGGCAACAGACTAGCTTCTTCCCCAGCACCACCAAGGCCCCCACAACTACCAGCAACGCCACTAATGGGGTTCCCGAATTCTCATGATCAGTCCCAGCGGCATGGAAGCACTCGAGCCCTGAAGCGTCCTACACGAGAGGTTCTCATGGAGATGGCAAGACGGAATGAGGAAAATCTTGCTAGCAATGTACCCCTTTTGCTGGGTAACCTAAGAAATTTAGATTCATGGGATCCCTCTCAATTCGGAACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_271777.p1 GENE.S_Transcript_271777~~S_Transcript_271777.p1 ORF type:internal len:363 (+),score=46.73,zf-RVT|PF13966.2|9.7e-18,zf-RVT|PF13966.2|1.3e+04 S_Transcript_271777:1-1086(+)
GGSTFPIARFLWKAKAPLKVRAFVWTLTLGKLNTNDMHQRRRPQWCLSPDICLLCHKSGETAAHLFLYCPVARSVWALLFGVRREAFVCPSTVLEFLEIRFWGFGRDKELGVLWRNAIFATLWCIWLERNARVFQQRALPISLLWDRITYLASLWSKASGMLAILYLMYNGIGLVCNWEDILSSLLYLILINKIFSYQKKKNHAVVPARGHSSVALASSPTPRSHHMSPLAPNVGLQQVRSAIRAPAPHMPAFLSSSTPVSSTSNMASVSCGALGQPPPGNRLASSPAPPRPPQLPATPLMGFPNSHDQSQRHGSTRALKRPTREVLMEMARRNEENLASNVPLLLGNLRNLDSWDPSQFGT

Click here to download the sequence:
Link to NCBI Protein BLAST