Transcript Information: S_Transcript_271778.p2


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4993240132496
Replicate 22.0198328468147
Replicate 32.3378116162311
Condition 2: 8 Hour
Replicate 13.4541125161553
Replicate 22.5207716777157
Replicate 30.45033480855594
Condition 3: 24 Hour
Replicate 12.4613953228838
Replicate 21.4364387618812
Replicate 31.9538203412414


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_271778.p2 GENE.S_Transcript_271778~~S_Transcript_271778.p2 ORF type:complete len:142 (+),score=10.52,zf-RVT|PF13966.2|1.4e-07,zf-RVT|PF13966.2|1.2e+03 S_Transcript_271778:433-858(+)
ATGCACCAACGTAGGCGGCCTCAGTGGTGCCTCTCGCCTGATATTTGTCTTTTGTGCCACAAGAGTGGGGAGACAGCTGCTCACCTCTTTCTCCACTGCCCGGTCGCACGTTCTATTTGGGCCTTGCTCTTTGGAATCAGGAGGGAAGCCTTTGTTTGCCCGTCTACTGTGTTGGAGTTCCTGGAGATACGCTTCTGGGGGTTTGGTAGAGATAAGGAGTTGGGGGTGTTATGGCGTAATGCTATCTTTGCTACTTTGTGGTGTATCTGGTTGGAGCGCAATGCTAGGGTGTTTCATCAGCGCGCTCTCCCTATCCCTCTCTTGTGGGAGCGGATCACCTACTTGGCCTCCTTGTGGAGTAAAGCAAGTGGAATGTTTCGTAGTTATTCTTTATCTGTTGTACAACGGAATTGGGCTTGCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_271778.p2 GENE.S_Transcript_271778~~S_Transcript_271778.p2 ORF type:complete len:142 (+),score=10.52,zf-RVT|PF13966.2|1.4e-07,zf-RVT|PF13966.2|1.2e+03 S_Transcript_271778:433-858(+)
MHQRRRPQWCLSPDICLLCHKSGETAAHLFLHCPVARSIWALLFGIRREAFVCPSTVLEFLEIRFWGFGRDKELGVLWRNAIFATLWCIWLERNARVFHQRALPIPLLWERITYLASLWSKASGMFRSYSLSVVQRNWACL*

Click here to download the sequence:
Link to NCBI Protein BLAST