Transcript Information: S_Transcript_27195.p1


Annotated TAIR IDAT5G19350.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6518978-6521295 | Forward length=425
E-Value8.9E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5282388001186
Replicate 27.0199784955729
Replicate 37.6146145193654
Condition 2: 8 Hour
Replicate 17.8354653816739
Replicate 210.084280258059
Replicate 39.850505332605
Condition 3: 24 Hour
Replicate 18.4400686213659
Replicate 26.6102783764346
Replicate 36.305511101279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27195.p1 GENE.S_Transcript_27195~~S_Transcript_27195.p1 ORF type:5prime_partial len:264 (+),score=55.45,RRM_1|PF00076.18|1.5e-13,RRM_1|PF00076.18|2.3e-13,RRM_6|PF14259.2|3e-06,RRM_6|PF14259.2|0.00012,RRM_5|PF13893.2|9.7e-06,RRM_5|PF13893.2|0.052 S_Transcript_27195:1-792(+)
CCTCATCCTCAGATGTGGCCTCAGCAACCACAACAACAACCTCATCCTCAGATGTGGCCTCAGCAACCACAACAACAACCTCATCCTCAGATGTGGCCTCAACAACAACAGCAGCAGTACCAGCAACAACAAAAGCAACAGCAACCACCGGCTAACGCTGATGAGGTCCGTACACTTTGGATTGGAGATCTCCAGTACTGGATGGACGAGAATTATATTCGTAATTGCTTCGCTCAAACTGGAGAGGTTGTTAATATTAAAATCATACGTAATAAGCAAACCCAACAGTCTGAGTGCTATGGTTTCATTGAGTTTACATCTCATGCTGCTGCCGAGAGAATTTTACAGACATACAACAACACCTTGATGCCAAGTGTTGAGCAAAACTACAGATTGAACTGGGCTTTCTATGGGTCTGGTGACAAACGTGGAGATGATACTTCTGACCACACAATATTTGTTGGGGACTTGGCTGCAGACGTTACTGATTACATATTGCAAGAGACTTTTAGAGCTCACTATCAATCTGTAAAGGGTGCTAAGGTTGTTATTGATAGGCTTACTGGTGGGTCAAAGGGGTATGGATTTGTTCGTTTTGGAGATGAAAGTGAACAATTACGTGCTATGTCAGAAATGAATGGAGTCATGTGCTCTGGCCGAGCAATGCGTGTTGGAGCAGCTGCAAATAAAAAGAATGGGGGTGGAACAGGGTGTCGAGAGGCTCTGTCGTTTAGGGGCCTGGGACTGGTTTCGGCTGAAACGGTTACTCACTTAGTACGTGGCCTTGCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27195.p1 GENE.S_Transcript_27195~~S_Transcript_27195.p1 ORF type:5prime_partial len:264 (+),score=55.45,RRM_1|PF00076.18|1.5e-13,RRM_1|PF00076.18|2.3e-13,RRM_6|PF14259.2|3e-06,RRM_6|PF14259.2|0.00012,RRM_5|PF13893.2|9.7e-06,RRM_5|PF13893.2|0.052 S_Transcript_27195:1-792(+)
PHPQMWPQQPQQQPHPQMWPQQPQQQPHPQMWPQQQQQQYQQQQKQQQPPANADEVRTLWIGDLQYWMDENYIRNCFAQTGEVVNIKIIRNKQTQQSECYGFIEFTSHAAAERILQTYNNTLMPSVEQNYRLNWAFYGSGDKRGDDTSDHTIFVGDLAADVTDYILQETFRAHYQSVKGAKVVIDRLTGGSKGYGFVRFGDESEQLRAMSEMNGVMCSGRAMRVGAAANKKNGGGTGCREALSFRGLGLVSAETVTHLVRGLA*

Click here to download the sequence:
Link to NCBI Protein BLAST