Transcript Information: S_Transcript_272319.p1


Annotated TAIR IDAT2G40435.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16887048-16888407 | Forward length=158
E-Value5.4E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0041527176932
Replicate 27.3991062540446
Replicate 33.4861269426318
Condition 2: 8 Hour
Replicate 15.0712818437085
Replicate 23.0011016467926
Replicate 34.5491138181363
Condition 3: 24 Hour
Replicate 10
Replicate 22.6256854875037
Replicate 32.4606872590357


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_272319.p1 GENE.S_Transcript_272319~~S_Transcript_272319.p1 ORF type:complete len:164 (-),score=38.09 S_Transcript_272319:97-588(-)
ATGGTTTCCAAGGAGCACAAAATTAGAGCTGCTGCTCTGCATGAGAAGCTTCAACTTCTTGGTTCTATCACCAACTCTCATGCAGTGAATGAGAGCTCAATCATCGTGGATGCATCCAAGTACATAAAAGAGCTGAAAGAGAAGGTTGAAATGCTTAATCAAGATGTTCAATGTTCAAGTGAATCATTACCCACCGTGAAAGTGGAAACCCTAAAGAAAGAGAAAGGATTCCTAATAAACGTATATAATTCAGACAAGAATTGCCCAGGTCTGCTGGTGTTTATACTAGAAGCTTTTGAAGACCTCAATCTTAATGTAATCCAAGCTAGGGCTTCTTGTTCTCATAATTTCCAATTGGAAGCCATCATTGCTCAAGGTGAAGAAGAAGGTGGCGAAAATGTTGATTCACAAGCGATAAAGCAAGCTGTATTCCAGGCGATCAGGCATTGGAATCAAACTACTACTACTACTACTGAACAGCAAGATCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_272319.p1 GENE.S_Transcript_272319~~S_Transcript_272319.p1 ORF type:complete len:164 (-),score=38.09 S_Transcript_272319:97-588(-)
MVSKEHKIRAAALHEKLQLLGSITNSHAVNESSIIVDASKYIKELKEKVEMLNQDVQCSSESLPTVKVETLKKEKGFLINVYNSDKNCPGLLVFILEAFEDLNLNVIQARASCSHNFQLEAIIAQGEEEGGENVDSQAIKQAVFQAIRHWNQTTTTTTEQQDQ*

Click here to download the sequence:
Link to NCBI Protein BLAST