Transcript Information: S_Transcript_272320.p1


Annotated TAIR IDAT2G40435.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16887048-16888407 | Forward length=158
E-Value6E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4553985050489
Replicate 21.2065588039266
Replicate 31.152671005225
Condition 2: 8 Hour
Replicate 10
Replicate 21.0486804049872
Replicate 30
Condition 3: 24 Hour
Replicate 11.8772946749729
Replicate 22.3017933632228
Replicate 31.7734249972347


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_272320.p1 GENE.S_Transcript_272320~~S_Transcript_272320.p1 ORF type:5prime_partial len:128 (-),score=21.74 S_Transcript_272320:97-480(-)
CTCTTTCTCTCTTCCTCTTTACTTTTTTCTTTGATTGCCAATGCATTAACTTGTACTGAATCAGCTGTCTTCAATTTGTGGGTGCAGGTGAAAGTGGAAACCCTAAAGAAAGAGAAAGGATTCCTAATAAACGTATATAATTCAGACAAGAATTGCCCAGGTCTGCTGGTGTTTATACTAGAAGCTTTTGAAGACCTCAATCTTAATGTAATCCAAGCTAGGGCTTCTTGTTCTCATAATTTCCAATTGGAAGCCATCATTGCTCAAGGTGAAGAAGAAGGTGGCGAAAATGTTGATTCACAAGCGATAAAGCAAGCTGTATTCCAGGCGATCAGGCATTGGAATCAAACTACTACTACTACTACTGAACAGCAAGATCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_272320.p1 GENE.S_Transcript_272320~~S_Transcript_272320.p1 ORF type:5prime_partial len:128 (-),score=21.74 S_Transcript_272320:97-480(-)
LFLSSSLLFSLIANALTCTESAVFNLWVQVKVETLKKEKGFLINVYNSDKNCPGLLVFILEAFEDLNLNVIQARASCSHNFQLEAIIAQGEEEGGENVDSQAIKQAVFQAIRHWNQTTTTTTEQQDQ*

Click here to download the sequence:
Link to NCBI Protein BLAST