Transcript Information: S_Transcript_272412.p1


Annotated TAIR IDAT5G63110.1
Annotated Gene Namehistone deacetylase 6
Annotated Gene Symbol(s)HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1
Annotation TypeOrtholog
Chromosome Positionchr5:25315834-25318227 | Reverse length=471
E-Value3.9E-261
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0523578503875
Replicate 24.6755580519237
Replicate 35.0890552107066
Condition 2: 8 Hour
Replicate 16.87308385497
Replicate 25.7287736031088
Replicate 36.5406243202923
Condition 3: 24 Hour
Replicate 14.6776019836372
Replicate 24.5027440217909
Replicate 32.6725345065024


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_272412.p1 GENE.S_Transcript_272412~~S_Transcript_272412.p1 ORF type:3prime_partial len:453 (+),score=64.83,Hist_deacetyl|PF00850.15|9.9e-83 S_Transcript_272412:120-1475(+)
ATGGAAGCCAACAGCAACACAGTAGAACAAGGAGGAGGAGCCTCGCTGCCATCCCAAACCTGCACAGACGCCAAGAAACGCCGAGTAACCTACTTCTACGAACCCACAATCGGGGACTACTACTACGGTCAAGGCCACCCTATGAAACCCCACCGGATCCGTATGGCCCACAATCTCATTGTCCACTACTCCCTCCACCGTCGCATGGAAATCAACCGCCCTTTCCCCGCCGCATCCACCGACATCCGCCGCTTCCACTCCGACGACTACGTCGACTTTCTTTCCTCCGTCTCACCCGACCTCTGTGGCCCCCCCACCAGTGGTGGGTCCCAGTCCCAGCAGCCAATGCTTGACCACTCTCACTCCAGGCACCTCAAGCGGTTCAATGTTGGCGATGATTGTCCGGTTTTCCCCGGTTTGTTCCCCTTTTGTCAGGCCTCGGCCGGTGGGTCCATTGGGGCTGCTGTTAAGTTGAATAGGAGGGATGCTGATATTGCCATCAATTGGGCTGGTGGCTTGCACCATGCTAAAAAGTCTGAGGCTTCTGGGTTTTGTTATGTTAATGATATTGTTCTTGGTATTCTTGAGCTCCTCAAAGTTCACCGGCGTGTATTGTACATAGATATTGACGTGCATCATGGGGACGGTGTTGAAGAGGCCTTCTACACCACTGACCGAGTTATGACTGTTTCTTTTCATAAATTTGGCGATTTTTTTCCTGGAACTGGGCACATTAAAGATGTTGGAGCAGGTCCAGGGAAGCATTATTCTCTAAATGTGCCATTAAATGATGGGATAGATGATGAGAGTTTTGGTGGCCTATTCAGATCCATTATCCAAAAAGTCATGGATGTTTATCAGCCAGATGCAGTTGTGCTCCAGTGTGGAGCTGATTCACTCTCAGGCGATCGGCTAGGCTGTTTCAATTTGTCGGTGAAAGGTCATGCAGATTGCTTGCGATTCCTTAGATCGTTTAATGTCCCTCTTATGGTGCTGGGTGGAGGCGGGTACACAATACGGAATGTAGCCCGTTGCTGGTGCTATGAGACAGCAGTTGCAGTTGGAGTAGAACCAGACAATAAATTACCATACAATGAGTATTATGAGTACTTTGGCCCAGATTACACTCTTTATATTGAGCCTAGCAACATGGAGAACCTGAACTCCCCCAAAGATTTGGAGAAAATTAGGAATATTCTTCTAGAGCAACTATCTAGAATACCTCATGTACCAAGTGTTCCTTTCCAGACCACTCCTCCTACAACAAAGGAACCTGAAGAGCCAGAGGAGGATAAGGATCAAAGACCAAAGCCACGCATATGGAATGGTGAAGATTATGATTCTGATCCAGAGGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_272412.p1 GENE.S_Transcript_272412~~S_Transcript_272412.p1 ORF type:3prime_partial len:453 (+),score=64.83,Hist_deacetyl|PF00850.15|9.9e-83 S_Transcript_272412:120-1475(+)
MEANSNTVEQGGGASLPSQTCTDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPAASTDIRRFHSDDYVDFLSSVSPDLCGPPTSGGSQSQQPMLDHSHSRHLKRFNVGDDCPVFPGLFPFCQASAGGSIGAAVKLNRRDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGPGKHYSLNVPLNDGIDDESFGGLFRSIIQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLYIEPSNMENLNSPKDLEKIRNILLEQLSRIPHVPSVPFQTTPPTTKEPEEPEEDKDQRPKPRIWNGEDYDSDPED

Click here to download the sequence:
Link to NCBI Protein BLAST