Transcript Information: S_Transcript_272416.p1


Annotated TAIR IDAT5G63110.1
Annotated Gene Namehistone deacetylase 6
Annotated Gene Symbol(s)HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1
Annotation TypeOrtholog
Chromosome Positionchr5:25315834-25318227 | Reverse length=471
E-Value3.3E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1578109109606
Replicate 21.4907290241564
Replicate 32.2430354696271
Condition 2: 8 Hour
Replicate 12.0172666516207
Replicate 22.6201264172653
Replicate 32.3044159572953
Condition 3: 24 Hour
Replicate 12.2632086499264
Replicate 22.6543202747073
Replicate 33.0675459411628


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_272416.p1 GENE.S_Transcript_272416~~S_Transcript_272416.p1 ORF type:internal len:222 (+),score=24.78,Hist_deacetyl|PF00850.15|2.1e-49 S_Transcript_272416:2-664(+)
TTACATTGCGTTGGTTACGTTTTGTTTATTCCAGCATCGTATCGTTTTATGCAGCGTGTATTGTACATAGATATTGACGTGCATCATGGGGACGGTGTTGAAGAGGCCTTCTACACCACTGACCGAGTTATGACTGTTTCTTTTCATAAATTTGGCGATTTTTTTCCTGGAACTGGGCACATTAAAGATGTTGGAGCAGGTCCAGGGAAGCATTATTCTCTAAATGTGCCATTAAATGATGGGATAGATGATGAGAGTTTTGGTGGCCTATTCAGATCCATTATCCAAAAAGTCATGGATGTTTATCAGCCAGATGCAGTTGTGCTCCAGTGTGGAGCTGATTCACTCTCAGGCGATCGGCTAGGCTGTTTCAATTTGTCGGTGAAAGGTCATGCAGATTGCTTGCGATTCCTTAGATCGTTTAATGTCCCTCTTATGGTGCTGGGTGGAGGCGGGTACACAATACGGAATGTAGCCCGTTGCTGGTGCTATGAGACAGCAGTTGCAGTTGGAGTAGAACCAGACAATAAATTACCATACAATGAGTATTATGAGTACTTTGGCCCAGATTACACTCTTCATGTTGAGCCTAGCAACATGGAAAACCTGAACTCCCCCAAAGATCTGCAGAAAATTAGGCATATTCTTCTAGAGCAACTATCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_272416.p1 GENE.S_Transcript_272416~~S_Transcript_272416.p1 ORF type:internal len:222 (+),score=24.78,Hist_deacetyl|PF00850.15|2.1e-49 S_Transcript_272416:2-664(+)
LHCVGYVLFIPASYRFMQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGPGKHYSLNVPLNDGIDDESFGGLFRSIIQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPSNMENLNSPKDLQKIRHILLEQLS

Click here to download the sequence:
Link to NCBI Protein BLAST