Transcript Information: S_Transcript_27258.p1


Annotated TAIR IDAT5G55640.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22533244-22533923 | Reverse length=149
E-Value7.5E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 177.564388215355
Replicate 274.485486112977
Replicate 362.579198505892
Condition 2: 8 Hour
Replicate 182.932073455517
Replicate 270.939793549902
Replicate 377.975921153265
Condition 3: 24 Hour
Replicate 186.445991932864
Replicate 286.587382689122
Replicate 388.816087990665


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27258.p1 GENE.S_Transcript_27258~~S_Transcript_27258.p1 ORF type:3prime_partial len:117 (+),score=27.17 S_Transcript_27258:214-561(+)
ATGGACCCACCCTCACTCCATTCCACTGCCCCGATCGACGAAGATGAATGGGACACTGAAGGATTTGTAATTCCGAGCTTGGGCATAGAGAACCCTTATCAAAGTAAATCTGATGCTCCAGAAGTAGAAGACTCCAAAGCCCCTCCAGTTAAGGATAAGCTGGAACAGATCTACTTAGGACCCCACGGTGCACCACCTCATCAAAAGCAACCAGAGGCAAATACTTCCAACCGTAAGCGTTTCAAGCAAAAGCTCAAGGAAGCAGATAGGAGGTCAAGTGGCACAGGACGGGAGAATAAGGTAGAGAGCTTAAAAGAACTTGTTGGTGGCGGTGGTAAGGCTGGAGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27258.p1 GENE.S_Transcript_27258~~S_Transcript_27258.p1 ORF type:3prime_partial len:117 (+),score=27.17 S_Transcript_27258:214-561(+)
MDPPSLHSTAPIDEDEWDTEGFVIPSLGIENPYQSKSDAPEVEDSKAPPVKDKLEQIYLGPHGAPPHQKQPEANTSNRKRFKQKLKEADRRSSGTGRENKVESLKELVGGGGKAGG

Click here to download the sequence:
Link to NCBI Protein BLAST