Transcript Information: S_Transcript_272649.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94372344805605
Replicate 22.9730000112963
Replicate 31.961993200383
Condition 2: 8 Hour
Replicate 10.30248780591678
Replicate 21.427990338706
Replicate 30.60470489659522
Condition 3: 24 Hour
Replicate 12.3239237755951
Replicate 21.4466262708307
Replicate 31.9676772230942


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_272649.p1 GENE.S_Transcript_272649~~S_Transcript_272649.p1 ORF type:complete len:141 (+),score=29.93,KIP1|PF07765.8|6.1e+02,KIP1|PF07765.8|3.3e-10 S_Transcript_272649:773-1195(+)
ATGTCGATACTCATACTTGTAGCCTTTACATGTAGCCAACCAAAGGGTGGAGCATTAACTTTTGCTAATCTATGGATGTTCTATGCTGTACTGAGGCTAACTCTGTGTAAAAATGTCTCATCGGTTTGTATTGAAGGTGAAGCAAGTTTGAGGCGGAGAAGCGAAGTAAAGATGGGAAAGAAAAAGCATCATTTGAGGAGGTCACTGAAGTCATTTTTTCAGAAGCATGCTGATCCTGAGAAACATGAGAAGCTGAAAGAAAGCAGAAAAGATATGGAGGAGAAGAAGACAAAGATATTAAATCTCCTGGAAATCCATGATGAAAATGATGGAAACCAAATTCATGAATCAAAAAAAGGGCCCATCATGGAGCTCCTTGAGGAATTCCACAGACACTATGAATCACTTTTTTTCTCACTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_272649.p1 GENE.S_Transcript_272649~~S_Transcript_272649.p1 ORF type:complete len:141 (+),score=29.93,KIP1|PF07765.8|6.1e+02,KIP1|PF07765.8|3.3e-10 S_Transcript_272649:773-1195(+)
MSILILVAFTCSQPKGGALTFANLWMFYAVLRLTLCKNVSSVCIEGEASLRRRSEVKMGKKKHHLRRSLKSFFQKHADPEKHEKLKESRKDMEEKKTKILNLLEIHDENDGNQIHESKKGPIMELLEEFHRHYESLFFSL*

Click here to download the sequence:
Link to NCBI Protein BLAST