Transcript Information: S_Transcript_272875.p3


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29570001372423
Replicate 21.9611368495569
Replicate 31.0245964490889
Condition 2: 8 Hour
Replicate 11.4216926878089
Replicate 20
Replicate 30.47368550233292
Condition 3: 24 Hour
Replicate 10
Replicate 20.75546038587825
Replicate 30.56048987566925


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_272875.p3 GENE.S_Transcript_272875~~S_Transcript_272875.p3 ORF type:3prime_partial len:90 (-),score=17.85,gag_pre-integrs|PF13976.2|4.9e-07 S_Transcript_272875:3-269(-)
ATGATTTCAGTAGGGCAGTTAGATGCCATTGGATACAGAACTGTGTTTGGTGACAACACTTGGAAGATTTCTAGGGGTGCAATGGTGATTGCACGGGGTTCCAAGGTGGTCACATTATACACTACTACAGGATGTGAGAACATAATTGCTGCAACCACAGGGGAAGAGGTCAAGCTTTGGCACAATAGGCTTGGCTACATAAGTGAGAAAGGGATGAAGATTATGGCTTCGAGGGGCAAACTTTCCAATGTGAAATCAGTCGATCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_272875.p3 GENE.S_Transcript_272875~~S_Transcript_272875.p3 ORF type:3prime_partial len:90 (-),score=17.85,gag_pre-integrs|PF13976.2|4.9e-07 S_Transcript_272875:3-269(-)
MISVGQLDAIGYRTVFGDNTWKISRGAMVIARGSKVVTLYTTTGCENIIAATTGEEVKLWHNRLGYISEKGMKIMASRGKLSNVKSVDL

Click here to download the sequence:
Link to NCBI Protein BLAST