Transcript Information: S_Transcript_272988.p1


Annotated TAIR IDAT2G03820.1
Annotated Gene Namenonsense-mediated mRNA decay NMD3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:1165149-1166699 | Reverse length=516
E-Value5E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.2510660493885
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.20118292752012
Replicate 20.21105517584648
Replicate 30.40218580386757
Condition 3: 24 Hour
Replicate 10.20608380651504
Replicate 20
Replicate 30.2379438151426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_272988.p1 GENE.S_Transcript_272988~~S_Transcript_272988.p1 ORF type:internal len:106 (-),score=20.69 S_Transcript_272988:1-315(-)
GATAATGTTTCAGCTGAGGTTAATGTTGCCGGTTCAAGATACGCGTTGGCTGATCTCCAAGTGGCTCGTGTATCAGATTTTGGAAAGAACAACACAATATTCTTCGTTAGGAAACACTTGGGTCATCTTCTAAGTCCAGGGGATTATGCCCTCGGTTATGATCTCTATGGGGCTAACTTCAATGACTCTGAGTTGGACAAATACAGAGGTCTTGTCCTTCCCGAAGCAATCTTGATTAAGAAGAGCTATGAAGAGAAGCGTCAAAGAAAACGTGGGAAGCAACGGGCTTGGAAACTCAGGAATATTAAAATGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_272988.p1 GENE.S_Transcript_272988~~S_Transcript_272988.p1 ORF type:internal len:106 (-),score=20.69 S_Transcript_272988:1-315(-)
DNVSAEVNVAGSRYALADLQVARVSDFGKNNTIFFVRKHLGHLLSPGDYALGYDLYGANFNDSELDKYRGLVLPEAILIKKSYEEKRQRKRGKQRAWKLRNIKME

Click here to download the sequence:
Link to NCBI Protein BLAST