Transcript Information: S_Transcript_272989.p1


Annotated TAIR IDAT2G03820.1
Annotated Gene Namenonsense-mediated mRNA decay NMD3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:1165149-1166699 | Reverse length=516
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9713334248282
Replicate 20.27238011799401
Replicate 31.3661285987852
Condition 2: 8 Hour
Replicate 12.1062113893465
Replicate 20.82858698665654
Replicate 31.0526344496287
Condition 3: 24 Hour
Replicate 10.8090697589109
Replicate 20.55960028583574
Replicate 30.93414979278208


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_272989.p1 GENE.S_Transcript_272989~~S_Transcript_272989.p1 ORF type:5prime_partial len:81 (-),score=26.16 S_Transcript_272989:33-275(-)
AAACATGGGAAGCCCCGTGCTTGGAAACTCATGCCCATTGACAGGGAGGTGGATAATGCTGCTAGAGATAAGATGGATAATGAATACGAAGAATTCTTGAGAGAGCTGGAGGAAAATCCTGAATTGACGTTCAATATATCATTGTATCGCAACAAGGAGCATCAGTATCAGCAATCAGAATCTGCATATATGGCTGATGGCGATGAGCTGCCTTTGGATGAGCTGCTTGCTGTTCTGATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_272989.p1 GENE.S_Transcript_272989~~S_Transcript_272989.p1 ORF type:5prime_partial len:81 (-),score=26.16 S_Transcript_272989:33-275(-)
KHGKPRAWKLMPIDREVDNAARDKMDNEYEEFLRELEENPELTFNISLYRNKEHQYQQSESAYMADGDELPLDELLAVLI*

Click here to download the sequence:
Link to NCBI Protein BLAST