Transcript Information: S_Transcript_272990.p1


Annotated TAIR IDAT2G03820.1
Annotated Gene Namenonsense-mediated mRNA decay NMD3 family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:1165149-1166699 | Reverse length=516
E-Value1E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24415597463468
Replicate 20.30361637005754
Replicate 30.50759824083304
Condition 2: 8 Hour
Replicate 10.39129156545198
Replicate 20.7183621122848
Replicate 30.6844538221783
Condition 3: 24 Hour
Replicate 10.50102943785766
Replicate 20.51981219211806
Replicate 30.92557961119692


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_272990.p1 GENE.S_Transcript_272990~~S_Transcript_272990.p1 ORF type:5prime_partial len:218 (+),score=36.16 S_Transcript_272990:3-656(+)
AAAGTAAGCAACAGCATAACGTTGATGGATCCGAACACTTTGAGGTATTGTTTCTTGGATGCTGATCAATACTGGAGATCACCTTTCCATTGCCTGCTTTCTAGTAGGCGACTAGTGGAGTATATTGTGTTGGATGTCGATAATGTTTCAGCTGAGGTTAATGTTGCCGGTTCAAGATACGCGTTGGCTGATCTCCAAGTGGCTCGTGTATCAGATTTTGGAAAGAACAACACAATATTCTTCGTTAGGAAACACTTGGGTCATCTTCTAAGTCCAGGGGATTATGCCCTCGGTTATGATCTCTATGGGGCTAACTTCAATGACTCTGAGTTGGACAAATACAGAGGCCTTGTTCTTACTGAAACAATCTTGATCAAGAAGAGCTATGAGAAGCATCGAAGAAAACATGGGAAGCCCCGTGCTTGGAAACTCATGCCCATTGACAGGGAGGTGGATAATGCTGCTAGAGATAAGATGGATAATGAATACGAAGAATTCTTGAGAGAGCTGGAGGAAAATCCTGAATTGACGTTCAATATATCATTGTATCGCAACAAGAGTATCGCAACAAGGAGTATCAGTATCAGCAATCAGAATCTGCATATATGGCTGATGGCGATGAGCTGCCTTTGGATGAGCTGCTTGCTGTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_272990.p1 GENE.S_Transcript_272990~~S_Transcript_272990.p1 ORF type:5prime_partial len:218 (+),score=36.16 S_Transcript_272990:3-656(+)
KVSNSITLMDPNTLRYCFLDADQYWRSPFHCLLSSRRLVEYIVLDVDNVSAEVNVAGSRYALADLQVARVSDFGKNNTIFFVRKHLGHLLSPGDYALGYDLYGANFNDSELDKYRGLVLTETILIKKSYEKHRRKHGKPRAWKLMPIDREVDNAARDKMDNEYEEFLRELEENPELTFNISLYRNKSIATRSISISNQNLHIWLMAMSCLWMSCLLF*

Click here to download the sequence:
Link to NCBI Protein BLAST