Transcript Information: S_Transcript_27321.p1


Annotated TAIR IDAT5G64270.1
Annotated Gene Namesplicing factor, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25706909-25710718 | Forward length=1269
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.601674918434
Replicate 244.93887410264
Replicate 348.645428587568
Condition 2: 8 Hour
Replicate 164.661928600813
Replicate 263.413224301155
Replicate 361.071993177252
Condition 3: 24 Hour
Replicate 154.603642105509
Replicate 246.429706539152
Replicate 346.942675586934


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27321.p1 GENE.S_Transcript_27321~~S_Transcript_27321.p1 ORF type:complete len:1275 (+),score=383.65,SF3b1|PF08920.6|3e+02,SF3b1|PF08920.6|4.1e-43,HEAT_2|PF13646.2|1.6e+04,HEAT_2|PF13646.2|1.1,HEAT_2|PF13646.2|0.31,HEAT_2|PF13646.2|1.6e+02,HEAT_2|PF13646.2|4.3,HEAT_2|PF13646.2|0.29,HEAT_2|PF13646.2|0.036,HEAT_2|PF13646.2|1.3,HEAT|PF02985.18|4.1e+03,HEAT|PF02985.18|5.1e+03,HEAT|PF02985.18|3.3e+03,HEAT|PF02985.18|4.2e+02,HEAT|PF02985.18|0.015,HEAT|PF02985.18|7.9e+03,HEAT|PF02985.18|7.1,HEAT|PF02985.18|7.9e+03,HEAT|PF02985.18|44,HEAT|PF02985.18|1.9e+02,HEAT|PF02985.18|3.9,HEAT|PF02985.18|1e+03,HEAT_EZ|PF13513.2|1.5e+03,HEAT_EZ|PF13513.2|4.8e+03,HEAT_EZ|PF13513.2|47,HEAT_EZ|PF13513.2|23,HEAT_EZ|PF13513.2|1,HEAT_EZ|PF13513.2|8.4e+03,HEAT_EZ|PF13513.2|15 S_Transcript_27321:349-4173(+)
ATGGCGTCAGTAGACCCAGAGATAGCCAAGACCCAAGAAGAGAGGAAAAAAATGGAGCAGGAGTTGGCCTCTCTCACTTCTGTGGCTTATGATGTCGATCTATATGGCAGCAACGGGCGTGACGATTATGTCCAGTCCATTCCTGTCGATGATGATGAGGAGAACGCAGATGCTATGGATAATGAGGTGGCTCGGAAACTGGCCTCTTACACGGCGCCCAAGTCTCTGCTGAAGGAGATGCCAGGTTTAGGGGGTGATGCTGATGATGGGTTCCGTAAGCCACAAAGGATTATTGATCGTGAGGATGATTACCGGAGGAGGAGGTTGAGCAGGGTTATATCGCCAGAGAGGCATGATGCTTTTGCTATGGGGGATAAGACCCCTGATGTGAATGTGCGGACATATGCTGATGTGATGAGGGAGGAGGCGTTGAAGAGAGAGAAAGAGGAGACGTTGAGGGCTATTGCTAAGAAGAAGAAAGAGGAGGAGGAGCAGAAGAAGTCAATAGAAGAAGAGAAAGGGGCTGGTGGTGCTCAAGCACAGCAGTCACAGAAGAGGAGGAATAGGTGGGACCAATCGCAAGATCAGCAGGCTGATGGTGGAGCTGCAAAGAAGGCTAAATCTGCATCAGATTGGGATATGCCAGATTCTACCCCGGGGATTGGCAGGTGGGATGCTACTCCTACACCAGGGAGACTTGGGGATGCTACACCATCAGTAAGGAGGAATAGGTGGGATGAGACACCGACACCTGGCAGGGTAAATGATTCAGATGCCACTCCGGCTGCTGGTGGGGCCACTCCAGGTGCAACTCCTGCTGGAATGACTTGGGATGCGACTCCAAAGCTCTCAGGGATGGCAACACCGACCCCAAAAAGGCAGAGGTCAAGGTGGGATGAGACACCGGCTACAATGGGGAGTGCAACACCCATGGCTGGGGCTACCCCTTCTGCAGCTATGACCCCTGGTGTGACTCCTGTTGGTGGTGTTGAACTGGCTACACCAACTCCAGGGCAGATTAATCTGCGTGGCCCTCTTACACCAGAGCAGTACAACTTGATGAGATGGGAGAAGGATATTGAGGAGAGAAACAGGCCTTTGACTGATGAAGAGCTTGATGCCATGTTCCCATCTGAAGGTTATAAGATCTTGGACCCTCCAGCATCATATGTCCCAATTAGGACTCCAGCTAGGAAGCTGCTTGCCACGCCTACTCCAATGGGGACTCCACTTTATCAGATTCCGGTGGAGGACAGGGGTCAGCAGTTTGATGTTGGTAAGGAGCCTGCTAATGGATTGCCATTCATGAAGCCAGAGGATTATCAATACTTTGGCGTATTGCTGAATGAAGAGAATGAGGAAGAATTGTCTCCAGAGGAGCAGAAGGAAAGAAAGATTATGAAGTTGCTTCTTAAAGTTAAGAATGGCACACCACCTCAAAGGAAGACTGCTTTGAGACAACTCACTGATAAGGCGAGGGAGTTTGGTGCTGGGCCATTGTTTAACAGAATTCTACCCTTGCTTATGCAGCCAACACTAGAGGACCAAGAGCGGCATCTTCTGGTGAAGGTTATTGATAGGGTATTGTACAAGCTGGATGAGTTGGTTCGACCTTACGTACACAAGATTCTCGTGGTTATTGAACCACTTTTAATCGATGAAGATTATTATGCTCGTGTTGAGGGGAGAGAGATCATCTCTAACTTGAGTAAGGCTGCTGGTTTGGCCACCATGATTGCTGCCATGAGACCAGATATTGACAATATTGATGAATATGTCAGGAATACAACTGCAAGGGCTTTCAGTGTTGTGGCTTCAGCTTTGGGTATTCCAGCACTGCTGCCATTCTTGAAGGCTGTGTGTCAGAGTAAGAAGTCATGGCAAGCTAGGCACACTGGTATTAAGATTGTTCAGCAGATTGCCATTTTGATTGGTTGTGCTGTTCTGCCACACTTGAGGTCTTTGGTCGAGATTATAGAACATGGTCTTAATGACGAGAACCAGAAGGTGCGTACAATTACAGCACTCTCTCTTGCTGCCCTTGCTGAGGCTTCGGCTCCATATGGTATCGAGAGCTTTGATTCTGTATTGAAGCCTTTGTGGAAAGGTATCAGGTCACACCGTGGTAAGGTCTTGGCTGCTTTCTTGAAGGCCATTGGTTTTATTATTCCTCTGATGGATGCGCTCTACGCTAGCTACTATACGAAAGAAGTCATGTTTATTTTGATTCGGGAATTCCAGTCACCTGATGAAGAAATGAAGAAGATTGTTCTGAAAGTGGTGAAGCAGTGTGTTAGCACTGAAGGTGTTGAGGCTGATTACATAAGATCTGATATTCTTCCAGAGTTCTTCAGAAACTTCTGGGTGAGGAGGATGGCATTGGATAGGAGAAACTACAAGCAGCTTGTGGAGACCACTGTAGAGATAGCCAACAAGGTTGGTGTTGCTGATATAGTGGGTAGGATCGTGGAAGATCTTAAAGACGAAAGTGAACCCTATAGGCGTATGGTTATGGAGACAATAGAGAAGGTGGTGACCAACTTGGGTGCATCTGATATTGATGCTCGCTTGGAGGAGCTTCTGATTGATGGTATACTTTACGCTTTTCAAGAGCAGACTTCTGATGATGCTAATGTCATGCTTAATGGGTTTGGGGCGGTGGTCAATGCTCTTGGACAGAGGGTCAAACCTTACCTCCCTCAGATTTGTGGTACAATTAAGTGGCGTTTGAACAACAAAAGTGCTAAAGTCAGGCAGCAGGCTGCTGATCTCATTGCGAGAATTGCAGTGGTGATGAAACAGTGTGGAGAGGAACAGCTTATGGGTCACTTGGGTGTGGTCTTGTATGAGTATCTTGGAGAGGAGTATCCTGAGGTGCTGGGATCAATCCTAGGAGCCCTTAAAGCTATTGTGAATGTCATTGGTATGACTAAGATGACTCCACCCATAAAGGATCTGCTTCCCCGGTTGACTCCTATTTTGAAGAATAGGCATGAGAAAGTGCAGGAGAACTGTATTGATCTTGTGGGTCGTATTGCTGACCGTGGAGCTGAGTTCGTCCCTGCAAGGGAATGGATGAGGATATGCTTTGAGCTTCTTGAGATGCTCAAGGCTCACAAGAAAGGTATCAGAAGGGCTACTGTCAACACCTTTGGGTACATTGCCAAAGCCATTGGGCCGCAGGATGTCTTGGCAACTCTTCTGAACAATCTTAAGGTGCAGGAGCGTCAGAACCGTGTTTGCACAACTGTGGCTATTGCGATTGTTGCTGAGACGTGTTCACCTTTCACTGTTTTGCCAGCACTGATGAATGAGTATCGTGTTCCGGAGCTGAATGTCCAGAATGGTGTCTTGAAATCTCTCTCGTTCCTTTTTGAGTATATTGGTGAAATGGGGAAGGATTACATCTATGCGGTGACTCCTCTACTTGAAGATGCTCTCATGGATAGAGATCTGGTGCACAGGCAAACTGCAGCTTCTGCTGTAAAGCACATGGCTCTCGGAGTGGCAGGATTGGGGTGCGAAGATGCCCTGGTCCATCTGATGAACTACGTGTGGCCCAATATTTTTGAGACTTCGCCTCATGTCATCAATGCTGTTATGGAAGCCATCGAAGGGATGAGGGTGGCTTTGGGAGCTGCCGCCATACTGAACTATTGTCTGCAGGGCCTGTTCCACCCAGCAAGGAAAGTTAGGGAAGTGTACTGGAAAATTTACAATTCTCTTTACATCGGAGCACAGGATTCCCTTGTGGCTGCTTACCCTATTCTGGAGGATGAGGGAGAAAACATCTATAGTAGACCTGAATTAATGATGTTTATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27321.p1 GENE.S_Transcript_27321~~S_Transcript_27321.p1 ORF type:complete len:1275 (+),score=383.65,SF3b1|PF08920.6|3e+02,SF3b1|PF08920.6|4.1e-43,HEAT_2|PF13646.2|1.6e+04,HEAT_2|PF13646.2|1.1,HEAT_2|PF13646.2|0.31,HEAT_2|PF13646.2|1.6e+02,HEAT_2|PF13646.2|4.3,HEAT_2|PF13646.2|0.29,HEAT_2|PF13646.2|0.036,HEAT_2|PF13646.2|1.3,HEAT|PF02985.18|4.1e+03,HEAT|PF02985.18|5.1e+03,HEAT|PF02985.18|3.3e+03,HEAT|PF02985.18|4.2e+02,HEAT|PF02985.18|0.015,HEAT|PF02985.18|7.9e+03,HEAT|PF02985.18|7.1,HEAT|PF02985.18|7.9e+03,HEAT|PF02985.18|44,HEAT|PF02985.18|1.9e+02,HEAT|PF02985.18|3.9,HEAT|PF02985.18|1e+03,HEAT_EZ|PF13513.2|1.5e+03,HEAT_EZ|PF13513.2|4.8e+03,HEAT_EZ|PF13513.2|47,HEAT_EZ|PF13513.2|23,HEAT_EZ|PF13513.2|1,HEAT_EZ|PF13513.2|8.4e+03,HEAT_EZ|PF13513.2|15 S_Transcript_27321:349-4173(+)
MASVDPEIAKTQEERKKMEQELASLTSVAYDVDLYGSNGRDDYVQSIPVDDDEENADAMDNEVARKLASYTAPKSLLKEMPGLGGDADDGFRKPQRIIDREDDYRRRRLSRVISPERHDAFAMGDKTPDVNVRTYADVMREEALKREKEETLRAIAKKKKEEEEQKKSIEEEKGAGGAQAQQSQKRRNRWDQSQDQQADGGAAKKAKSASDWDMPDSTPGIGRWDATPTPGRLGDATPSVRRNRWDETPTPGRVNDSDATPAAGGATPGATPAGMTWDATPKLSGMATPTPKRQRSRWDETPATMGSATPMAGATPSAAMTPGVTPVGGVELATPTPGQINLRGPLTPEQYNLMRWEKDIEERNRPLTDEELDAMFPSEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYQIPVEDRGQQFDVGKEPANGLPFMKPEDYQYFGVLLNEENEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSDILPEFFRNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLIARIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVINAVMEAIEGMRVALGAAAILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDSLVAAYPILEDEGENIYSRPELMMFI*

Click here to download the sequence:
Link to NCBI Protein BLAST