Transcript Information: S_Transcript_273347.p1


Annotated TAIR IDAT5G07660.1
Annotated Gene Namestructural maintenance of chromosomes 6A
Annotated Gene Symbol(s)SMC6A
Annotation TypeOrtholog
Chromosome Positionchr5:2422839-2429912 | Forward length=1058
E-Value5.3E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24871963771197
Replicate 20
Replicate 30.68944807789161
Condition 2: 8 Hour
Replicate 10.99651356622117
Replicate 20.62724809270261
Replicate 30.59764058705555
Condition 3: 24 Hour
Replicate 10.81663115852688
Replicate 21.2708679388606
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_273347.p1 GENE.S_Transcript_273347~~S_Transcript_273347.p1 ORF type:internal len:107 (-),score=7.98,AAA_23|PF13476.2|9.5e-16,SMC_N|PF02463.15|1.1e-11,AAA_15|PF13175.2|9.7e-09,AAA_29|PF13555.2|1.5e-06 S_Transcript_273347:2-319(-)
AAGAACCTCACCAATTCGGTCATTCTCGCGGTAAACCCTAACGGCATGGGCGATTTCTGGTCCGGCCCCGTCGCCGGTACAATTCGAAGAATCCGGTTGGAGAATTTCATGTGTCATGGCAGTTTGGAGATTGAATTATGTGATCACGTCAATTTCATCACCGGCCAAAATGGAAGTGGTAAAAGTGCTATTTTGACTGCATTATGTATTGCTTTTGGATGTCGAGCTAAGAGTACTAACCGAGCGGCGACATTGAAGGATTTTATCAAGACTGGCGAAAGTTACGCTGCTGTGCATGTGGAAATTAAAAATGGAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_273347.p1 GENE.S_Transcript_273347~~S_Transcript_273347.p1 ORF type:internal len:107 (-),score=7.98,AAA_23|PF13476.2|9.5e-16,SMC_N|PF02463.15|1.1e-11,AAA_15|PF13175.2|9.7e-09,AAA_29|PF13555.2|1.5e-06 S_Transcript_273347:2-319(-)
KNLTNSVILAVNPNGMGDFWSGPVAGTIRRIRLENFMCHGSLEIELCDHVNFITGQNGSGKSAILTALCIAFGCRAKSTNRAATLKDFIKTGESYAAVHVEIKNGG

Click here to download the sequence:
Link to NCBI Protein BLAST