Transcript Information: S_Transcript_273351.p1


Annotated TAIR IDAT5G61460.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)MIM, ATRAD18, SMC6B
Annotation TypeOrtholog
Chromosome Positionchr5:24714551-24721841 | Reverse length=1057
E-Value1.6E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43627870877345
Replicate 20.72337014942671
Replicate 30.30233993579673
Condition 2: 8 Hour
Replicate 10.87399140643988
Replicate 20.55012742556705
Replicate 30.34944012467183
Condition 3: 24 Hour
Replicate 10.53716926616215
Replicate 20.37153789469422
Replicate 30.82695227557758


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_273351.p1 GENE.S_Transcript_273351~~S_Transcript_273351.p1 ORF type:3prime_partial len:122 (+),score=14.02,AAA_23|PF13476.2|1.7e-17,SMC_N|PF02463.15|2.3e-13,AAA_15|PF13175.2|1.9e-08,AAA_29|PF13555.2|5.2e-06,AAA_21|PF13304.2|4.8e-06 S_Transcript_273351:168-530(+)
ATGGGCGATTTCCGGTCTGGCCCCGTCGCCGGTACAATTCGAAGAATCCGGTTGGAGAATTTCATGTGTCATGGCAATTTGGAGATCGAGTTATGTTATCACGTCAATTTCATTACCGGCGAAAATGGAAGTGGTAAAAGTGCTATTTTGACTGCATTATGTATTGCTTTTGGTTGCCGAGCTAAGAGTACTAACCGAGCGGCGACATTGAAGGATTTTATCAAGACTGGCAACAGTTACGCTGCTGTGCAGGTGGAAATCAAAAATGAAGGAGAAGATGCTTATAAGCAAGAAGTGTATGGTGACATCATAATTGTTGAGCGCAGGATAACCGAATCAACAACGTCAACTGTCATAAAGGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_273351.p1 GENE.S_Transcript_273351~~S_Transcript_273351.p1 ORF type:3prime_partial len:122 (+),score=14.02,AAA_23|PF13476.2|1.7e-17,SMC_N|PF02463.15|2.3e-13,AAA_15|PF13175.2|1.9e-08,AAA_29|PF13555.2|5.2e-06,AAA_21|PF13304.2|4.8e-06 S_Transcript_273351:168-530(+)
MGDFRSGPVAGTIRRIRLENFMCHGNLEIELCYHVNFITGENGSGKSAILTALCIAFGCRAKSTNRAATLKDFIKTGNSYAAVQVEIKNEGEDAYKQEVYGDIIIVERRITESTTSTVIKD

Click here to download the sequence:
Link to NCBI Protein BLAST