Transcript Information: S_Transcript_273474.p1


Annotated TAIR IDAT3G48550.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17994048-17994595 | Forward length=158
E-Value5.3E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6074967189035
Replicate 21.0365068919638
Replicate 31.2377675223893
Condition 2: 8 Hour
Replicate 12.7193450739968
Replicate 21.6516129868255
Replicate 32.8611875979841
Condition 3: 24 Hour
Replicate 10.43982986893814
Replicate 20.60842447184825
Replicate 31.184928260643


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_273474.p1 GENE.S_Transcript_273474~~S_Transcript_273474.p1 ORF type:complete len:149 (+),score=26.85 S_Transcript_273474:111-557(+)
ATGGAAAAAGATTTAGATCACCAAAAGGAGCTTCAACTCCTACCTCCTTCTTCTTCCACTTCCTCATCACGTGCCCTCACGTGGCTCTCCCACCACCACCATCACCGTCGCCCGCCACCTCCACCGCCTTCGTTGGACTTGAAGCTGTCCATCAGCCTACAGCCAGCGGCGGAGGCGGCAGAATTGGGGTGTGTGGAAGCACTGAAATGGCAGGCGGCCGAGCATATACGCTTGGCCGCCATCGAGAAGGCGTACGCGGAGCGGGTGAGGGAGCTGACTAGGAGAGAGATTGAGCTTGCTCAGTCGGAGTTCGCCCGGGCCCGTGCAATGTGGGATAAGGCCCGAGAAGAGGTGACCCGGGTTGAACGCCTTCGTGAGACTGCCACCTCTTGCATGGGGGAGCTCACTTGCCACTCTTGCAGGCAAAGGTTCCGTCCACCTCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_273474.p1 GENE.S_Transcript_273474~~S_Transcript_273474.p1 ORF type:complete len:149 (+),score=26.85 S_Transcript_273474:111-557(+)
MEKDLDHQKELQLLPPSSSTSSSRALTWLSHHHHHRRPPPPPPSLDLKLSISLQPAAEAAELGCVEALKWQAAEHIRLAAIEKAYAERVRELTRREIELAQSEFARARAMWDKAREEVTRVERLRETATSCMGELTCHSCRQRFRPPP*

Click here to download the sequence:
Link to NCBI Protein BLAST