Transcript Information: S_Transcript_273475.p1


Annotated TAIR IDAT3G48550.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17994048-17994595 | Forward length=158
E-Value4E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52182355363099
Replicate 20.57680495575202
Replicate 30.24108151743269
Condition 2: 8 Hour
Replicate 12.2301061769551
Replicate 21.9008760282121
Replicate 32.0897889808805
Condition 3: 24 Hour
Replicate 10.85666209767036
Replicate 20.14812948742711
Replicate 30.82424981716066


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_273475.p1 GENE.S_Transcript_273475~~S_Transcript_273475.p1 ORF type:complete len:153 (+),score=30.30 S_Transcript_273475:110-568(+)
ATGGAAAAAGATTTAGATCACCAAAAGGAGCTTCAACTCCTACCTCCTTCTTCTTCCACTTCCTCATCACGTGCCCTCACGTGGCTCTCCCACCACCACCACCACCACCATCATCAATGTCACCCGCCACCTCCACAGCCTTCATTGGACCTGAAGCTCTCCATCAGCCTACAGCCAGCGGCGGAGGCGGCAGAATTGGGGTGTGTGGAAGCACTGAAATGGCAGGCGGCCGAGCATATACGCTTGGCCGCCATCGAGAAGGCGTACGCGGAGCGGGTGAGGGAGCTGACTAGGAGAGAGATTGAGCTTGCTCAGTCGGAGTTCGCCCGGGCCCGTGCAATGTGGGATAAGGCCCGAGAAGAGGTGGCCCGGGCTGAACGCCTTCGTGACACTGCCTCCTCTTGCATGGGGGAACTCACTTGCCACTCTTGCAGGCAAAGGTTCCGTCCACCTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_273475.p1 GENE.S_Transcript_273475~~S_Transcript_273475.p1 ORF type:complete len:153 (+),score=30.30 S_Transcript_273475:110-568(+)
MEKDLDHQKELQLLPPSSSTSSSRALTWLSHHHHHHHHQCHPPPPQPSLDLKLSISLQPAAEAAELGCVEALKWQAAEHIRLAAIEKAYAERVRELTRREIELAQSEFARARAMWDKAREEVARAERLRDTASSCMGELTCHSCRQRFRPPS*

Click here to download the sequence:
Link to NCBI Protein BLAST