Transcript Information: S_Transcript_273822.p1


Annotated TAIR IDAT3G25060.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9128516-9130321 | Forward length=601
E-Value5.6E-216
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11706598783804
Replicate 20.22645091921203
Replicate 30.18929494513959
Condition 2: 8 Hour
Replicate 10.68791581668171
Replicate 20.62326264538828
Replicate 30.84388252981598
Condition 3: 24 Hour
Replicate 10.096091862861851
Replicate 20.16615697636618
Replicate 30.22189481881334


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_273822.p1 GENE.S_Transcript_273822~~S_Transcript_273822.p1 ORF type:complete len:682 (+),score=121.38,PPR|PF01535.16|1.5,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.015,PPR|PF01535.16|6.6e-06,PPR|PF01535.16|0.00022,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|0.41,PPR|PF01535.16|3.3e-06,PPR|PF01535.16|0.0042,PPR|PF01535.16|0.02,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|2e+03,PPR|PF01535.16|9.9e+02,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|2.9e-09,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|9.7e-05,PPR_2|PF13041.2|7e-05,PPR_2|PF13041.2|7.7e-05,PPR_2|PF13041.2|8.1,PPR_2|PF13041.2|2.9e-11,PPR_2|PF13041.2|0.0041,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|9e+03,DYW_deaminase|PF14432.2|5.7e-38,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|45,PPR_3|PF13812.2|8e+03,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.44,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|23,PPR_1|PF12854.3|1,PPR_1|PF12854.3|8.4e+02,PPR_1|PF12854.3|6.1e+03,PPR_1|PF12854.3|31,PPR_1|PF12854.3|0.93,PPR_1|PF12854.3|9.2e-06,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|3.2,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|14 S_Transcript_273822:81-2126(+)
ATGTGGTCATCTATATGGCCAAAACACCTGAGATCTTTACTATTATTACCCCCCAAAAACGACATACCCACAATTTCAAAAATCCATGCCCTCCTTATAAAAACCGATTTACTCAACCAAGCAAATTATAACACAAAGCTCATAGCATCTTATGCTAGTGCAGGTGATATTGCAGCAGCACACCAAGTGTTCGACAAATTGCCTCACAGAGGGGTGAGTGCTTGGAATGCAATGATGGTTGCTTATTCACAACTGGGCATGCTTAATGATGTTATCAATCTCTACAACAAGATGGTTTATGAAGGGATAAGACCAGATAGTTCGTCTTTCACTGTTTCTATTAAGGCCTGCACCAGTTTGTCTGATTTTGAAACAGGCGCAGAAATATGGCGTCAGGCGGTTCATTGTGGGTACCAAAACGATGTCTTTGTTGGGGCTTCGGTGTTGAATTTGTTTTCTAGAGGTGGGAAAATGGAGGAAGCGAAAGTGATTTTTGATGGAATGCAGAGAAAAGATTTAATTTGTTGGACAACAATGATAACTGGGTTCGCAAAGAGTGGACAGGGGATTGGAGCCGTTGAGTTTTATAGGCGGATGCAAGATCAGGGGATGAGTGGAGATGGGGTTGTTATGTTGGGATTAATTCAGGCTTGTACTGATCTTGGGGATGATAAAATGCGTCTTTCTATTCCTGGGCATATGATAAGAAGAAATATTCCTTTTGATGTTGTTATCTACACTAGCCTTGTTGACATGTATGCAAAAAATGGCCAATTGAATCTTGCATATCGAGTTTTCAGTAATATGCCTCACAAAAATACGGTTTCCTGCAGGGCACTGATATCTGGCTATGCTCAAAATGGTTTTGCAAGCGAATCTCTTGAGTTGTTGATAGAGATGCAGAGGGTTGGATACACACCGGATTTAGCTTCTCTTGTGAGTGCTCTTTTGGCATGTTCACATGTTGGGCATCTGAAAAGGGGGAAATCGATACATGTATACATTCTTCGTAGGCAAGAGATTGAAGCTGTTTCAGCGACTGCATTAATTGACATGTATTCTAAATGTGGGGCTCTTTCAAATGCTCGTGTCCTCTTTTATCAGATACTTTGTAAGGATGTTATCGTATGGAATGCGATGATAGCTAGCTACGGGATTCATGGACATGGAAGGGCAGCCCTTTCGGTTTTCCTTGAGATGATCGAGAAAGGCTCAAAACCTGATGATGTAACTTTTGCTTCACTTCTTTCAGCCTTGGGACATTCGGGCCTTGTAGAAGAAGGCCAGTACTGGTTCAATGAAATGATCAACAGATTCAAGATTGAACCAAGAGAGAAACATTATGCTGCTGTTGTTGATTTATTGGCTCGTGCAGGAAAATCCAGAGAAGCACTCAATTTGATAGAATCGATGAAAGAAGATGAACCCGGGCTTCCTATCTGGGTTGCCCTTTTGTCTGGTTGTCACAACCATGGAAATTTTGCCGTTGGTGAGTTGGCTGCAAGGAAGGTTCTTAAATTAGAGCCAGATGATTCTGGTATATTTTCTTTAGTTGCAAATTTTTTTGCCGCTGCAAGGCAGTGGGATTCAGTTGCTCGAGTGAGGAAAGCCATGAGGAAGGCTGGCATGAAGAAAGTACCCGGCTACAGCATGGTGGAGGTGAAAGGAAAGCTTCATGCTTTTCTTATGGAGGATAAGAGCCATTATCAATACGAGCTAATAGGCTTGATGCTTAACAAGTTGGATCATGAGATGAGAGGCATGGGTTATGTACCAAAAACACAGTTTGTTTTCCATGATGTTGATGAGGAAGTGAAAGTCAGAATGTTAGCTAATCATAGTGAGAGACTAGCTATTGCGTTTGGTCTCTTAAACACTGAACCAGGGACTAAGCTGGTGATTACAAAGAATCTAAGAGTTTGTGGAGATTGCCATGAGGCTATCAAATATATATCAAAAATTGTGGATAGAGAGATTGTTGTAAGGGATGTGAAGCGGTTTCATCACTTTAAGAATGGTGTCTGCTCATGTGGAGATTATTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_273822.p1 GENE.S_Transcript_273822~~S_Transcript_273822.p1 ORF type:complete len:682 (+),score=121.38,PPR|PF01535.16|1.5,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.015,PPR|PF01535.16|6.6e-06,PPR|PF01535.16|0.00022,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|0.41,PPR|PF01535.16|3.3e-06,PPR|PF01535.16|0.0042,PPR|PF01535.16|0.02,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|2e+03,PPR|PF01535.16|9.9e+02,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|2.9e-09,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|9.7e-05,PPR_2|PF13041.2|7e-05,PPR_2|PF13041.2|7.7e-05,PPR_2|PF13041.2|8.1,PPR_2|PF13041.2|2.9e-11,PPR_2|PF13041.2|0.0041,PPR_2|PF13041.2|0.26,PPR_2|PF13041.2|9e+03,DYW_deaminase|PF14432.2|5.7e-38,PPR_3|PF13812.2|1.7,PPR_3|PF13812.2|0.032,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|0.45,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|45,PPR_3|PF13812.2|8e+03,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.44,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|23,PPR_1|PF12854.3|1,PPR_1|PF12854.3|8.4e+02,PPR_1|PF12854.3|6.1e+03,PPR_1|PF12854.3|31,PPR_1|PF12854.3|0.93,PPR_1|PF12854.3|9.2e-06,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|3.2,PPR_1|PF12854.3|0.0037,PPR_1|PF12854.3|14 S_Transcript_273822:81-2126(+)
MWSSIWPKHLRSLLLLPPKNDIPTISKIHALLIKTDLLNQANYNTKLIASYASAGDIAAAHQVFDKLPHRGVSAWNAMMVAYSQLGMLNDVINLYNKMVYEGIRPDSSSFTVSIKACTSLSDFETGAEIWRQAVHCGYQNDVFVGASVLNLFSRGGKMEEAKVIFDGMQRKDLICWTTMITGFAKSGQGIGAVEFYRRMQDQGMSGDGVVMLGLIQACTDLGDDKMRLSIPGHMIRRNIPFDVVIYTSLVDMYAKNGQLNLAYRVFSNMPHKNTVSCRALISGYAQNGFASESLELLIEMQRVGYTPDLASLVSALLACSHVGHLKRGKSIHVYILRRQEIEAVSATALIDMYSKCGALSNARVLFYQILCKDVIVWNAMIASYGIHGHGRAALSVFLEMIEKGSKPDDVTFASLLSALGHSGLVEEGQYWFNEMINRFKIEPREKHYAAVVDLLARAGKSREALNLIESMKEDEPGLPIWVALLSGCHNHGNFAVGELAARKVLKLEPDDSGIFSLVANFFAAARQWDSVARVRKAMRKAGMKKVPGYSMVEVKGKLHAFLMEDKSHYQYELIGLMLNKLDHEMRGMGYVPKTQFVFHDVDEEVKVRMLANHSERLAIAFGLLNTEPGTKLVITKNLRVCGDCHEAIKYISKIVDREIVVRDVKRFHHFKNGVCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST