Transcript Information: S_Transcript_273920.p1


Annotated TAIR IDAT2G37310.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:15665102-15667075 | Reverse length=657
E-Value1.2E-198
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.68590209369022
Replicate 20.56862859684317
Replicate 30.66545954940827
Condition 2: 8 Hour
Replicate 12.1984938471271
Replicate 21.576023701424
Replicate 31.5382570436584
Condition 3: 24 Hour
Replicate 10.33780747665867
Replicate 20.38941257004033
Replicate 30.2166842302845


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_273920.p1 GENE.S_Transcript_273920~~S_Transcript_273920.p1 ORF type:complete len:582 (+),score=78.34,PPR_2|PF13041.2|39,PPR_2|PF13041.2|0.24,PPR_2|PF13041.2|0.055,PPR_2|PF13041.2|2.4e-10,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|7.2e-06,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|8.8e+03,PPR_2|PF13041.2|3.6e-09,PPR_2|PF13041.2|0.0037,PPR_2|PF13041.2|1.6e+02,PPR|PF01535.16|8.4,PPR|PF01535.16|16,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.024,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|7.7e-06,PPR|PF01535.16|0.066,PPR|PF01535.16|6.7,PPR|PF01535.16|0.03,PPR|PF01535.16|0.0082,PPR|PF01535.16|2.9,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|9.4,PPR_1|PF12854.3|52,PPR_1|PF12854.3|3.7e+03,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|6.6e+02,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|4.9e-05,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|24,PPR_1|PF12854.3|5.3,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|4.5,ATP13|PF12921.3|2.3e+03,ATP13|PF12921.3|17,ATP13|PF12921.3|32,ATP13|PF12921.3|3.4e+03,ATP13|PF12921.3|0.2 S_Transcript_273920:138-1883(+)
ATGAAGATCTTAAAACGACCGTTAAACTTTCAAACTCCATCTTCTATTTCCATTCAACGCGCCATACAAAGCCTATACAACAACCCCAATACCCTCAACATACACGACTATGGGCACCTTGTTCAGTTTTGCACCAACCAACGTCTCATACCCCAAGCCAAACAACTCCATGCTCGTCTCATTCTCTTCAATATCACCCTAGATAACTTCGTAGGATCAAAACTTATCAACTTCTACTCGAGCATAGGCCATCTCCGAAATGCACGGAAGGTGTTCGATAAAATTCCTCAGAGAAATGCTTGGTCGTATAATGCTATGCTAGTTGCTTATTCTTTTCATGAGCACCCTATGGAGACATTGAGATTGTACTCATCCTTTGTAAAGGGAACAACTGTTTTGGGTAAACCAGATAATTTTTCTCTAACATGTGTTATGAAGGCGTATTCGAGCTTGTTTTCGGATGCCACTTTGGCTAAGGAGGTTCATTGTCATGTTTTAAGACAAGGGTTTGATTCTGATTTGTTTGTTGCTAATGCTTTGATTACTTGTTACATGAGATGTGATGAGATGGGTTTGGCTAGAAAAATGTATGATACGATGGAGAAGAAAGATATTGTGTCATGGAATTCTTTGATTTCAGGTTATTCTCATGGTGGGTATTATCAGGACTGTCTGAAACTGTACAAGCTGATGTTGGACTCTAAGAATTTGAAGCCGGATGCGGTAACTGTAGTTAGTGTTCTGCAGGCTTGTGCACAGGCGAAGGATCTTGTTCAAGGCATGGAAGTCCATTGGTTTGTAATCGAGAATAATATTAGAATGGACATCTCAGTTTACAATGCAGTTATAGGATTGTATGCTAGGTGTGATAGGTTGGACTATGCTAAGGAGTTATTTGATGAGATGAATGAGAAAGATGAGGTTACGTATGGTTGTTTGATTTCTGGTTATTTGGCTCATGGATATGTGGACAGAGCATTGGATCTTTTTCGAGGAATGGAAAGTCTCAGCTTGAGTATATGGAATGGTTTAATTTCAGGTTTAGTGCAGAACAATATCTGTGAGGTCAGCTTAAGTTTAACGAGGGAAATGCAGGCATCAGGTTTCAGACCAAATTCAGTTACACTTTCGAGTATCCTCTCTGCATTATCCTACTTCTTCGACTTAAAAGGAGGTAAACAGGTACACGCCTATGCAATTAGAAATGGTTTTGATGGCTGTGTTTATGTGACAACGGGCATAATAGATGTGTATGGAAAAGCTGGATTTATCCAGGGGGTAAGCCATGTGTTTGATCGATCCAGACAAAGGAATGTGATCATTTGGACAGCTACAATTGCAGCTTATGCATCTTATGGAGATGCTAATCATGCCCTTTGCCTTTTTGATGATATGTTGAATTATGGGACTGAACCAGATCCTGTCACCTTCGTTGCAGTCTTAACAGCTTGTGCTCATTTAGGAGATACAGACAAGGCTTGGAAGATATTCGACGACTTGCAGCAAAAATATGGCATCCAGCCTGTGGCAGAGCATTATTACTGCATCATACGTGTCCTGAGTCGAACTGGAAACTTGGCTAAAGCAGCTGAATTCATGTCTAAGATGCCCATTGAACCAACTCCTGGACTTTCCGATGCACCATTGAATGGCACTTCGATTAAGGGTGAAGTTGAGCTAGGGAAATTTGTTTCTGAGTATTTATCTGGAACAAAACCTGAAATTATAGAAAATACTACAAGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_273920.p1 GENE.S_Transcript_273920~~S_Transcript_273920.p1 ORF type:complete len:582 (+),score=78.34,PPR_2|PF13041.2|39,PPR_2|PF13041.2|0.24,PPR_2|PF13041.2|0.055,PPR_2|PF13041.2|2.4e-10,PPR_2|PF13041.2|0.0003,PPR_2|PF13041.2|7.2e-06,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|8.8e+03,PPR_2|PF13041.2|3.6e-09,PPR_2|PF13041.2|0.0037,PPR_2|PF13041.2|1.6e+02,PPR|PF01535.16|8.4,PPR|PF01535.16|16,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|0.024,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|7.7e-06,PPR|PF01535.16|0.066,PPR|PF01535.16|6.7,PPR|PF01535.16|0.03,PPR|PF01535.16|0.0082,PPR|PF01535.16|2.9,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|3.2e+03,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|9.4,PPR_1|PF12854.3|52,PPR_1|PF12854.3|3.7e+03,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|6.6e+02,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|4.9e-05,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|24,PPR_1|PF12854.3|5.3,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|4.5,ATP13|PF12921.3|2.3e+03,ATP13|PF12921.3|17,ATP13|PF12921.3|32,ATP13|PF12921.3|3.4e+03,ATP13|PF12921.3|0.2 S_Transcript_273920:138-1883(+)
MKILKRPLNFQTPSSISIQRAIQSLYNNPNTLNIHDYGHLVQFCTNQRLIPQAKQLHARLILFNITLDNFVGSKLINFYSSIGHLRNARKVFDKIPQRNAWSYNAMLVAYSFHEHPMETLRLYSSFVKGTTVLGKPDNFSLTCVMKAYSSLFSDATLAKEVHCHVLRQGFDSDLFVANALITCYMRCDEMGLARKMYDTMEKKDIVSWNSLISGYSHGGYYQDCLKLYKLMLDSKNLKPDAVTVVSVLQACAQAKDLVQGMEVHWFVIENNIRMDISVYNAVIGLYARCDRLDYAKELFDEMNEKDEVTYGCLISGYLAHGYVDRALDLFRGMESLSLSIWNGLISGLVQNNICEVSLSLTREMQASGFRPNSVTLSSILSALSYFFDLKGGKQVHAYAIRNGFDGCVYVTTGIIDVYGKAGFIQGVSHVFDRSRQRNVIIWTATIAAYASYGDANHALCLFDDMLNYGTEPDPVTFVAVLTACAHLGDTDKAWKIFDDLQQKYGIQPVAEHYYCIIRVLSRTGNLAKAAEFMSKMPIEPTPGLSDAPLNGTSIKGEVELGKFVSEYLSGTKPEIIENTTR*

Click here to download the sequence:
Link to NCBI Protein BLAST