Transcript Information: S_Transcript_274023.p1


Annotated TAIR IDAT1G06150.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)EMB1444
Annotation TypeOrtholog
Chromosome Positionchr1:1867129-1873194 | Reverse length=1322
E-Value6.2E-210
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24550739146845
Replicate 20.12211876138846
Replicate 30.17013594173063
Condition 2: 8 Hour
Replicate 10.86560624903492
Replicate 21.2382942051509
Replicate 30.98320330281279
Condition 3: 24 Hour
Replicate 10.28212949157594
Replicate 20.37633635458879
Replicate 30.18614054911525


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_274023.p1 GENE.S_Transcript_274023~~S_Transcript_274023.p1 ORF type:complete len:542 (+),score=85.88,PPR|PF01535.16|6.9e+03,PPR|PF01535.16|0.00062,PPR|PF01535.16|79,PPR|PF01535.16|0.0037,PPR|PF01535.16|0.054,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|3.4e-09,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.44,PPR|PF01535.16|0.00057,PPR|PF01535.16|0.0022,PPR|PF01535.16|0.0027,PPR|PF01535.16|80,PPR|PF01535.16|0.32,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|6.6e-13,PPR_2|PF13041.2|0.071,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|4.9e-09,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|0.079,PPR_2|PF13041.2|64,PPR_2|PF13041.2|21,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|9e+02,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|7.6,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|2,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|0.14,PPR_1|PF12854.3|0.0079,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.0042,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|0.0061,PPR_1|PF12854.3|96,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|0.69,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|9.1e+02,PPR_1|PF12854.3|1.9e+03 S_Transcript_274023:41-1666(+)
ATGATCGCGCAACACTTGCAAAAGAACAGAACTTACTTGAGCCAATTTTTTCTGCGTAGAATTGCACGCAACAAACTCATCCACACCCAACCCATAGTCGCCCATTTGAAGAGCTGTTCAAGTCTTCCATTTTTGCAATCCCTTCAAGCCTTCATGATAAAGTCCAATACAATAGAAGATTGTTACCTGATGAACCAATTTGTTAGCGCCTGTTTCACCATCAATCAGATAGACTATGCAACTTCAGCCTTTGCCCAGATGGAATGTCCAAATGTCTTCGTGTATAATGCATTGATAAAAGGCACAGTTAATTGTGGCAGGCCAGTACGAGCTTTGGAATTATACTTAGAGATGTCGAGGGCTGAAGTTTATCCTACCAGTTACACCTTTTCTTCATTAATTAAGGCTTGTGGCCAAATATTAGCTTTGAATTGTGGAAACTCTCTTCATTGCCAGGTTTGGAAAAATGGGTTTGATTCTCATGTTTTTGTGTTGACCTCTTTGGTTGATTTTTATGGGAAAGTAGATAGAGTTGTGGAAGCACAGAAGGTGTTCGATGAAATGCCTGAAAGAGACCCTTTTGCGTGGATTACCATGCTTACGGTTTTTACGCAACGTAAAGATATGTACTCAGCAAGGCGCTTGTTTTATGAGATGCCTGAAAGGAATGTTACTGCTTGGAATTCTATGGTTGATGGGTATGCAAGGGTTGGGGATGTTGAGTCTGCTGCGTTGTTATTTAGCCAAATGCCTAAGAAGGATTTGATTTCTTGGACTACAATGATCACTTGTTATTCTCAAAACAAGCAATATAAAGAGGCATTATCTGTATTTGATGAGATGTTCAAGAATGGAATCAGCCCAGATGAGATAACACTGGCAACAGTTCTCTCATGTTGTGCACATCTTGGAGCCCTTGACCTAGGCAAGGGAATTCATTTTTACATCATGCAAAAGGGGCTTTACCTTGATGTTTATGTGGGTTCTGCTCTGATAGATATGTATGCAAAGTGTGGGAGATTAGATAGATCACTCATTGTGTTTCTCAATTTGAGGGTGAAAAATCTGTATTGTTGGAATTCAATAATTGAAGGGCTTGCTGCTCATGGGCATGGAAAATCAGCTCTGGTGATGTTTCATAGAATGCTGAAGGAGACTGTGAAGCCTAATGGTGTAACATTTGTGAGTGTTCTCAGTGCATGCACTCATGCAGGACTAGTAGAGGAGGGACGCGAGATATTCCAGAGCATGATTCATGACTTTCAGATTTATCCACAGATAGAGCACCTTGGTTGCATGGTTGATCTACTTTGCAAAGCTAAGTTGCTCGAGGAAGCCCTGGAAGTGATCAAAAGTATGGAAACTGAACCTAATTCGGTTATTTGGGGAGCCTTGTTGAGTGGCTGTAAGCATTGCAAGAACTTAGAGATAGCTGAAATTGCTGCTACCAAGTTAATGGAATTGGAGCCAGAAAATTGTGGTTACTACACCCTGTTAGTTAATATGTATGCTGAAGCAAATAGATGGAAAGAGGTTGCCAAGATCAGGACTATGATGAGGGAACTAGGTGTAGAGAAAAGATGTCCTGGGTCTAGTTGGATTGAAATGGATAATGAATTGCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_274023.p1 GENE.S_Transcript_274023~~S_Transcript_274023.p1 ORF type:complete len:542 (+),score=85.88,PPR|PF01535.16|6.9e+03,PPR|PF01535.16|0.00062,PPR|PF01535.16|79,PPR|PF01535.16|0.0037,PPR|PF01535.16|0.054,PPR|PF01535.16|4.1e-06,PPR|PF01535.16|3.4e-09,PPR|PF01535.16|1e+03,PPR|PF01535.16|0.44,PPR|PF01535.16|0.00057,PPR|PF01535.16|0.0022,PPR|PF01535.16|0.0027,PPR|PF01535.16|80,PPR|PF01535.16|0.32,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|6.6e-13,PPR_2|PF13041.2|0.071,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|2e-05,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|1.6e+02,PPR_2|PF13041.2|4.9e-09,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|0.079,PPR_2|PF13041.2|64,PPR_2|PF13041.2|21,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|9e+02,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|7.6,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|43,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|2,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|0.14,PPR_1|PF12854.3|0.0079,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.0042,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|0.0061,PPR_1|PF12854.3|96,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|0.69,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|9.1e+02,PPR_1|PF12854.3|1.9e+03 S_Transcript_274023:41-1666(+)
MIAQHLQKNRTYLSQFFLRRIARNKLIHTQPIVAHLKSCSSLPFLQSLQAFMIKSNTIEDCYLMNQFVSACFTINQIDYATSAFAQMECPNVFVYNALIKGTVNCGRPVRALELYLEMSRAEVYPTSYTFSSLIKACGQILALNCGNSLHCQVWKNGFDSHVFVLTSLVDFYGKVDRVVEAQKVFDEMPERDPFAWITMLTVFTQRKDMYSARRLFYEMPERNVTAWNSMVDGYARVGDVESAALLFSQMPKKDLISWTTMITCYSQNKQYKEALSVFDEMFKNGISPDEITLATVLSCCAHLGALDLGKGIHFYIMQKGLYLDVYVGSALIDMYAKCGRLDRSLIVFLNLRVKNLYCWNSIIEGLAAHGHGKSALVMFHRMLKETVKPNGVTFVSVLSACTHAGLVEEGREIFQSMIHDFQIYPQIEHLGCMVDLLCKAKLLEEALEVIKSMETEPNSVIWGALLSGCKHCKNLEIAEIAATKLMELEPENCGYYTLLVNMYAEANRWKEVAKIRTMMRELGVEKRCPGSSWIEMDNELH*

Click here to download the sequence:
Link to NCBI Protein BLAST