Transcript Information: S_Transcript_27421.p1


Annotated TAIR IDAT1G01620.1
Annotated Gene Nameplasma membrane intrinsic protein 1C
Annotated Gene Symbol(s)PIP1C, TMP-B, PIP1;3
Annotation TypeOrtholog
Chromosome Positionchr1:225986-227176 | Reverse length=286
E-Value4.8E-188
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11021.1898560604
Replicate 21017.1981423791
Replicate 3950.30026036545
Condition 2: 8 Hour
Replicate 1317.0323369168
Replicate 2323.13995092977
Replicate 3340.59184656912
Condition 3: 24 Hour
Replicate 1986.96287684038
Replicate 21083.4447396895
Replicate 31031.3721912518


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27421.p1 GENE.S_Transcript_27421~~S_Transcript_27421.p1 ORF type:5prime_partial len:277 (+),score=53.81,MIP|PF00230.16|3.4e-83 S_Transcript_27421:3-833(+)
AGACTAGGAGCAAACAAGTTCAATGAAAGGCAGCCACTGGGAACAGCAGCACAAGACAGGGACTACAAGGAGCCACCACCAGCACCGCTGTTTGAGGCAGGAGAGCTGACGTCATGGTCCTTCTACAGAGCTGGAATTGCTGAGTTTATTGCTACCTTTTTGTTCCTTTACATCTCCATCTTGACTGTCATGGGAGTTCAAAGGGCTCCCAGCAAGTGTGCCTCCGTTGGTATTCAGGGCATTGCTTGGTCTTTTGGTGGCATGATCTTCGCCCTTGTTTACTGTACTGCTGGAATTTCAGGAGGTCACATTAACCCAGCAGTGACATTCGGTCTATTTTTGGCAAGGAAGTTGTCCTTGACAAGGGCACTCTTCTACATCATAATGCAGTGCTTGGGTGCCATTTGTGGTGCTGGTGTGGTCAAGGGTTTCCAACCCGGCCCCTACCAGCAATTCGGTGGTGGTGCCAACACCGTCGCCTCTGGCTACACCAAGGGTGATGGCCTTGGTGCTGAGATTGTCGGCACCTTTGTTCTCGTCTACACCGTCTTCTCTGCCACTGATGCCAAGCGTAGCGCTAGGGACTCCCATGTTCCTATCTTGGCACCCCTGCCAATTGGGTTCGCTGTGTTCTTGGTTCACTTGGCCACCATCCCTGTCACTGGCACTGGCATCAACCCAGCCAGGAGTCTTGGTGCTGCAATCATTTACAACAGGTCCAATGCCTGGCACAACCATTGGATTTTCTGGGTGGGACCCTTCATTGGAGCAGCACTAGCAGCGCTGTACCATCAAGTGGTGATAAGGGCAATCCCCTTCAAATCCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27421.p1 GENE.S_Transcript_27421~~S_Transcript_27421.p1 ORF type:5prime_partial len:277 (+),score=53.81,MIP|PF00230.16|3.4e-83 S_Transcript_27421:3-833(+)
RLGANKFNERQPLGTAAQDRDYKEPPPAPLFEAGELTSWSFYRAGIAEFIATFLFLYISILTVMGVQRAPSKCASVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAICGAGVVKGFQPGPYQQFGGGANTVASGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPVTGTGINPARSLGAAIIYNRSNAWHNHWIFWVGPFIGAALAALYHQVVIRAIPFKSK*

Click here to download the sequence:
Link to NCBI Protein BLAST