Transcript Information: S_Transcript_27462.p1


Annotated TAIR IDAT5G01590.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 59 proteins in 31 species: Archae - 0; Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:224249-226620 | Forward length=527
E-Value8.8E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.330077588174
Replicate 217.183518789987
Replicate 319.092960753215
Condition 2: 8 Hour
Replicate 120.23178055728
Replicate 224.522987932008
Replicate 320.769287409982
Condition 3: 24 Hour
Replicate 113.372989572768
Replicate 214.600724765531
Replicate 315.682937867284


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27462.p1 GENE.S_Transcript_27462~~S_Transcript_27462.p1 ORF type:5prime_partial len:312 (+),score=65.03 S_Transcript_27462:3-938(+)
AGAACAAAGTTTCATATCGGCCCAGTTCGTAGTATACAGGTCCAAGTTCATCTCCTCCTCAGGCTCTCAGAGCGAGCCTATCTTCTCCCTTCAGCTTCCTCTCCCCATTCTTCCTCCATTATCAAACCCCACAAGACCTCCATAAGTGAAAACCTTCTTGAGGTCACACAAGTGACCAACAAAATGGGTTCAATAAACCTAGGACCCTTTGGTGAACACTGGTTCAATTGGTTCGAAAAACCCCCACACCCAATCTCAATTCCCAACATCCTCTCCTTAACCCTCTCAAAAACCTCTTCAAAACCCCACAACTTCTCATGCATCTCTCTCTCAGACCCAGACCCATCTCCTAAACCCCAAGAGCAACCCAAACCCGGAAAATACGAAGAAATGCTGGACCAGTTCTGGTGGGAATGTGAGAATTTACCTGATTATAGACACACCCCAGAAGTGGAAAAGATCCTTAAGGAAGACCCAGTTTTTGAAAAGAAAGAAAACCCAACAAAAGAGGAGCTTGAAGAGAACCAAAAGTGGTGGGAAGAGTTTAGGAGTAACCCAGTTGTGAAGTTCTTAGCAAGGGCTGAAGAGATTGCTGATAAGTTCAATGAAATGGAGGTTGAAGAGAATGATAAGCCTTATAGGGGCGAGGATGAGAAGCTTTGGAAAACTGTTCCTCATGTTATTGGGTTAGATGGTAGGCCTATGCCTAGGAAAGCTATCAAGACTGATGAGGAATCTGATGATAAGTTTTGGGATTTTTGTAGGCAGTTTTTCTTTGGGCTTTGGGGGTTTAGGCAACGGCCGTACCCGCCTGGTAAGCCCATTGATGCTGCTCAGGCTATTGGATATAAGCGGCTCGAGAAGCGCTATTATGATTGTAAGGAGCTCATTATCTTGATTGTTCATTATAGTCATGAATATGTTGTTACATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27462.p1 GENE.S_Transcript_27462~~S_Transcript_27462.p1 ORF type:5prime_partial len:312 (+),score=65.03 S_Transcript_27462:3-938(+)
RTKFHIGPVRSIQVQVHLLLRLSERAYLLPSASSPHSSSIIKPHKTSISENLLEVTQVTNKMGSINLGPFGEHWFNWFEKPPHPISIPNILSLTLSKTSSKPHNFSCISLSDPDPSPKPQEQPKPGKYEEMLDQFWWECENLPDYRHTPEVEKILKEDPVFEKKENPTKEELEENQKWWEEFRSNPVVKFLARAEEIADKFNEMEVEENDKPYRGEDEKLWKTVPHVIGLDGRPMPRKAIKTDEESDDKFWDFCRQFFFGLWGFRQRPYPPGKPIDAAQAIGYKRLEKRYYDCKELIILIVHYSHEYVVTL*

Click here to download the sequence:
Link to NCBI Protein BLAST