Transcript Information: S_Transcript_27495.p1


Annotated TAIR IDAT1G03475.1
Annotated Gene NameCoproporphyrinogen III oxidase
Annotated Gene Symbol(s)LIN2, HEMF1, ATCPO-I
Annotation TypeOrtholog
Chromosome Positionchr1:869302-871175 | Reverse length=386
E-Value1.1E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 190.550736702702
Replicate 290.291966264129
Replicate 3101.61947582064
Condition 2: 8 Hour
Replicate 1104.81429340871
Replicate 2115.43873898099
Replicate 3104.87397021651
Condition 3: 24 Hour
Replicate 182.464435176993
Replicate 290.145310544922
Replicate 385.18745497828


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27495.p1 GENE.S_Transcript_27495~~S_Transcript_27495.p1 ORF type:complete len:400 (+),score=65.33,Coprogen_oxidas|PF01218.14|6e-135 S_Transcript_27495:62-1261(+)
ATGGCGACGACAACAACTTCGCTACCCTCCACTGCCATTCTCTCACTTCCGTCAACCTCAACACCGCTATCCCAAACCCTGACCCTAATTCCCCCTTCCAAACCCTCATTTTCACTCTCTCTCCTCCCGACCCGCCGGAATTCGAACCGGAACCGCCATCTCGCCCCCTTCAAGGTGGCGATCGAGAAGGAGATGCCGGAGAGCGAAGCACCGGCGACGTTTCTCCGGGAATCCGACGGCCGAGAGTTGACATCGAGTTCGGAGACGACGGTGAGAGGGAGGTTCGAGAGGATGATAAGAGAAGCGCAAATTAGGGTATGCGAGGCGATTGAATTGGCTGATGGTGAAGGGAAATTCAAGGAAGATGTGTGGTCAAGGCCTGGTGGAGGAGGAGGGATGAGTAGAGTATTGCAAGACGGTGCCGTTTGGGAGAAAGCTGGAGTGAATGTGAGTGTAGTGTATGGAGTGATGCCACCTGAGGCTTATAGAGCTGCTAAAGCTGATGCGGGTTCTGGTCAACATAAGGCTGGCCCTGTTCCTTTCTTTGCTGCTGGCATTAGTTCGGTTTTACATCCAAAGAACCCATTCGCTCCAACTTTGCACTTCAACTATCGTTATTTTGAGACAGATGCTCCAAAAGATGCCCCTGGAGCACCTCGACAATGGTGGTTTGGTGGTGGCACCGATTTGACTCCTGCTTACATATTCGAAGATGATGTTAAGCACTTCCACCAGGTTCAAAAACAAGCTTGTGACAAATTTGATCCTAGCTTCTATCCTCGTTTCAAGAAATGGTGCGATGATTACTTCTATATTAAGCATCGTGGTGAGAGAAGAGGGCTTGGAGGAATCTTTTTTGATGATCTTAATGACTGTGACCAGGAAATGCTCCTTTCTTTTGCTACTGAGTGTGCAAACTCTGTGATACCTGCTTACATTCCTATCATAGAGAAAAGGAAAAATACACCTTTTAATGATGCAAACAAGGCGTGGCAGCAGCTACGTCGAGGACGTTATGTAGAATTCAATCTGGTTTACGATCGGGGAACCACATTTGGATTGAAAACCGGTGGTCGCATTGAGAGCATTCTAGTCTCTCTTCCGTTGACTGCTCGCTGGGAATATGACCATAAACCTGAAGAAGGGAGTGAAGAGTGGAAGTTGTTGGATGCTTGCATCAATCCTAAAGAATGGTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27495.p1 GENE.S_Transcript_27495~~S_Transcript_27495.p1 ORF type:complete len:400 (+),score=65.33,Coprogen_oxidas|PF01218.14|6e-135 S_Transcript_27495:62-1261(+)
MATTTTSLPSTAILSLPSTSTPLSQTLTLIPPSKPSFSLSLLPTRRNSNRNRHLAPFKVAIEKEMPESEAPATFLRESDGRELTSSSETTVRGRFERMIREAQIRVCEAIELADGEGKFKEDVWSRPGGGGGMSRVLQDGAVWEKAGVNVSVVYGVMPPEAYRAAKADAGSGQHKAGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEDDVKHFHQVQKQACDKFDPSFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLNDCDQEMLLSFATECANSVIPAYIPIIEKRKNTPFNDANKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHKPEEGSEEWKLLDACINPKEWL*

Click here to download the sequence:
Link to NCBI Protein BLAST