Transcript Information: S_Transcript_27502.p1


Annotated TAIR IDAT1G03475.1
Annotated Gene NameCoproporphyrinogen III oxidase
Annotated Gene Symbol(s)LIN2, HEMF1, ATCPO-I
Annotation TypeOrtholog
Chromosome Positionchr1:869302-871175 | Reverse length=386
E-Value1.7E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 145.975154828441
Replicate 247.428391923041
Replicate 355.493861568918
Condition 2: 8 Hour
Replicate 162.826898419338
Replicate 260.886258723088
Replicate 361.267106888569
Condition 3: 24 Hour
Replicate 146.175113007064
Replicate 252.791752713767
Replicate 349.235847162083


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27502.p1 GENE.S_Transcript_27502~~S_Transcript_27502.p1 ORF type:internal len:334 (-),score=50.88,Coprogen_oxidas|PF01218.14|8.9e-100 S_Transcript_27502:2-1000(-)
ACAACATCGCTACTCTCCAACGCCATTCTCTCACTTCCTTCAACCTCAACACCGCCATCCCAAAACCTGACCCTAATTCCCCCTTCCAAACCCTCACTTTCACTCTCTCTCCTCCCGACTCGCCCTAATTCGAACCGGAATCGCCATCTCGCCCCCGTCAAGGTGGCGATCGAGAAGGAGATGCCGGAGAGCGAAGCACCAGCGACGTTTCTCCGGGACTCCGACGGCGGAGCGTCGACGTCGAGTTCGGAGTCGACGGTGAGAGGGAGGTTCGAGAGGATGATAAGAGAAGCGCAAATTAGGGTATGCGAGGCGATTGAATTGGCTGATGGTGAAGGGAAATTCAAGGAAGATGTGTGGTCAAGGCCAGGTGGAGGAGGAGGGATAAGTAGAGTATTGCAAGACGGTGCCGTTTGGGAGAAAGCTGGAGTGAATGTGAGTGTAGTGTATGGAGTGATGCCACCTGAGGCTTATAGAGCTGCTAAAGCTGATGCTGGTTCTGGTCAACATAAGGCTGGCCCTGTTCCTTTCTTTGCTGCTGGCATTAGTTCGGTTTTACATCCAAAGAACCCATTCGCTCCAACTTTGCACTTCAACTATCGTTATTTTGAGACAGATGCTCCAAAAGATGCCCCTGGAGCACCTCGACAATGGTGGTTTGGTGGTGGCACCGATTTGACTCCTGCTTACATATTCGAAGATGATGTTAAGCACTTCCACCAGGTTCAAAAACAAGCTTGTGACAAATTTGATCCTAGCTTCTATCCTCGTTTCAAGAACTGGTGCGATGATTACTTCTATATTAAGCATCGTGGTGAGAGAAGAGGGCTTGGAGGAATCTTTTTTGACGATCTTAATGACTATGACCAGAAAATGCTCCTTTCTTTTGCTACTGAGTGTGCAAACTCTGTGATACCTGCTTACATTCCTATCATAGAGAAAAGGAAAAATACACCTTTTACTGATGCAAACAAGGCGTGGCAACAGCTACGTCGAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27502.p1 GENE.S_Transcript_27502~~S_Transcript_27502.p1 ORF type:internal len:334 (-),score=50.88,Coprogen_oxidas|PF01218.14|8.9e-100 S_Transcript_27502:2-1000(-)
TTSLLSNAILSLPSTSTPPSQNLTLIPPSKPSLSLSLLPTRPNSNRNRHLAPVKVAIEKEMPESEAPATFLRDSDGGASTSSSESTVRGRFERMIREAQIRVCEAIELADGEGKFKEDVWSRPGGGGGISRVLQDGAVWEKAGVNVSVVYGVMPPEAYRAAKADAGSGQHKAGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEDDVKHFHQVQKQACDKFDPSFYPRFKNWCDDYFYIKHRGERRGLGGIFFDDLNDYDQKMLLSFATECANSVIPAYIPIIEKRKNTPFTDANKAWQQLRRG

Click here to download the sequence:
Link to NCBI Protein BLAST