Transcript Information: S_Transcript_275026.p1


Annotated TAIR IDAT1G53430.1
Annotated Gene NameLeucine-rich repeat transmembrane protein kinase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19935298-19940959 | Forward length=1030
E-Value2E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7337460088065
Replicate 22.1559729209298
Replicate 32.5231104739779
Condition 2: 8 Hour
Replicate 17.0853088350084
Replicate 25.3925628642989
Replicate 36.1795128235939
Condition 3: 24 Hour
Replicate 11.067339584231
Replicate 21.1811758476272
Replicate 31.7252864251057


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_275026.p1 GENE.S_Transcript_275026~~S_Transcript_275026.p1 ORF type:3prime_partial len:307 (+),score=27.14,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|4.2e-08,LRR_4|PF12799.3|2.7e+03,LRR_4|PF12799.3|6.2,LRR_4|PF12799.3|0.044,LRR_4|PF12799.3|0.00031,LRR_4|PF12799.3|0.17,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|6e+03,LRR_1|PF00560.29|0.52,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|0.071,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|36,LRR_1|PF00560.29|7.1e+03 S_Transcript_275026:322-1239(+)
ATGATATCTATCCTGCTTCATTCCATCCATCTTGCTCTGCCCTTCTCCTCCCCTTCCCTCCAAGATTTGAAAAGTATAAGAAAAACCAACCAACATATTTCAAGAAACATCAATTTACAAAACAAAAAAGAGGGAGACGTAATGATGAAATACTCGCAATGGCTTTATGGATATTTTTCTTTCAGCTTCCTGCTGATATGGCTTTGCTTCACTGCAAATTATATCAGAACGAATGCCCAACTTCTCCCTGAAAACGAAGTGAAATCTCTACAAATTATTTCCACCAAATTGAAGAATTCACACTGGAATTTAGTCAGAAAAACTTCTTGCAACAATGGAGGTCAAAGCTTCAATCAAAATATCTCACTGAGCATTCTCAGTCACGTTACCTGTAATTGTTCATTCAATCAAGGAAATATCTGCCATGTCACTAATATTCTGTTGAAGGGTCTTAATCTTACAGGAGTATTCCCTGAAGAGTTGGGAAACCTTACTCACCTGCAGGAACTTGATCTCTCTAGAAACTATATCAATGGAAGTATCCCCAAAAGTCTTGCCAATACCCCCCTTGTCACTTTGGCACTTCTTGGAAATCGGATCACTGGTCCAATTCCAGATGAAATAGGACAAATCACTACACTTGAAAAGTTGGACGTAGAAGACAACCAACTTGAAGGAAAGTTACCACCAAGTTTGGGAAATTTGAGAAGTTTGAGAACAATGGTACTGTCCGGAAACAACTTTACCGGAACAATACCAGAAACATTTGGCAATCTAAGGAACCTAACAGAACTAAGGGCTAATGGAAACAGCATATCTGGGAAGATACCTTATTTTATCGGCAATTGGACAAACATTACCATACTGGAAATGCAAGGGACGTCTATGGAAGGACCTATACCATCTAGCTTAGCTCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_275026.p1 GENE.S_Transcript_275026~~S_Transcript_275026.p1 ORF type:3prime_partial len:307 (+),score=27.14,LRR_8|PF13855.2|0.00011,LRR_8|PF13855.2|4.2e-08,LRR_4|PF12799.3|2.7e+03,LRR_4|PF12799.3|6.2,LRR_4|PF12799.3|0.044,LRR_4|PF12799.3|0.00031,LRR_4|PF12799.3|0.17,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|6e+03,LRR_1|PF00560.29|0.52,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|0.071,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|36,LRR_1|PF00560.29|7.1e+03 S_Transcript_275026:322-1239(+)
MISILLHSIHLALPFSSPSLQDLKSIRKTNQHISRNINLQNKKEGDVMMKYSQWLYGYFSFSFLLIWLCFTANYIRTNAQLLPENEVKSLQIISTKLKNSHWNLVRKTSCNNGGQSFNQNISLSILSHVTCNCSFNQGNICHVTNILLKGLNLTGVFPEELGNLTHLQELDLSRNYINGSIPKSLANTPLVTLALLGNRITGPIPDEIGQITTLEKLDVEDNQLEGKLPPSLGNLRSLRTMVLSGNNFTGTIPETFGNLRNLTELRANGNSISGKIPYFIGNWTNITILEMQGTSMEGPIPSSLAH

Click here to download the sequence:
Link to NCBI Protein BLAST