Transcript Information: S_Transcript_275115.p1


Annotated TAIR IDAT1G24050.1
Annotated Gene NameRNA-processing, Lsm domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8507057-8508439 | Forward length=188
E-Value9E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.18776842176608
Replicate 30.14126351042758
Condition 2: 8 Hour
Replicate 10.43558244052016
Replicate 20.43791703720316
Replicate 30.21769376277428
Condition 3: 24 Hour
Replicate 10.22309668245713
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_275115.p1 GENE.S_Transcript_275115~~S_Transcript_275115.p1 ORF type:internal len:1175 (+),score=252.29,PCNA_N|PF00705.14|0.0047,PCNA_N|PF00705.14|23,PCNA_N|PF00705.14|0.21 S_Transcript_275115:2-3523(+)
TTATTTTGTCTTTCCACCATGCGTGAACCTTCAATTGAACAACCCATTTCCTTGTCCCTATCTCTTTCTTCTTCTTCTTCTCCTTCTCCTGATTCCCTTTCACTCTCCTTTCATCTTTCTGCCATGACTGAACAAAACCCATCAGTCACTCAAGCTTCAGAACTGAACCTAGAGTTTTCAGAAGATCATTCTGTACGTGAACTTTTAGTGGGGTCTGAAATGGTTGAAACTTCAAATGATCAATCTGTGCCTGAGTCTTTACAAGGGTCTGAAATTGTCGGAATTTTGAATGATCGAGTTTTGGCTGATTCTTTAGATGGGTCTGGGATGGTCACATCTTCAGATGATCAAAATTTGCCTGGTTTTTTAGAAGGGTTTGAAATTGTTGGAACTTCAAATGATAAAGTTTTGTCTGGTTTTTTAGAAGGGTCTGAAGTTGTTACTTCAAATGGTCATTTTGCACCTGATTCTTTAGAAGGGTCTGAATGTGTAACAACTTCATATGATCAAGTTGTGCCTGACTCGTTACAAGGGTCTGGAATTGTCGAATCCTTAGAGGGGTTTGCAATGGCCGAAACTTCAAGAGAACAATCTGTGTCCGAATCCTCAGACGGGTCTACAATGGCCGAAACTTCAAGAGAACAGTCTGTGGCCGAATCCTTAGACAGGTCTGCAATGGATGCCACTTCTGTGATTGATACTTCAGGAACTTCTTACAGTTTCAGGTTTCAAATACACCCTGCTAGTAAACTGAAGCATGCCCTTGAAGTTCTGAGTGACGACGATTTTAATCCTCAAGGTTCTGGCCTTATCAAAGTGGGGCCTAATGGAGTGGAGATTAAAGCTTTGAACATTGAAACAAGGGTCCTTTGTTGTCTGGAAATGGGAGCTTCTGGTTTCGTCAACTTCTCTTACAATGAGCCTTTTAACAAGATGGTTGACTTGAATAAGATATGCAACGATCTTAACCTTTGTGATGATGGCAGTGTGATCAACATTCAGCATGCTTATGGGTCTGATGAGCTTACCTTCACATTTGGAGAATCTTGTCCTAGAGAGTTTGCTGTGGAATTGGCTGAAATGAATGATGACTTTGAAAAGGTTCCACTCATCACCCATACATATGAGTCTGTTATAAACTGTGAAGCTTTGAGGGAGATAATAAATCATGTAGAGGCTAGTACATCTAAAGCTGTTTTTTTTAACATAGCTGATGGCATTATGTCCATCAAAATTGAAGATCAAGAATGGACTTGTGACTATGAGAAGAAAGTTTCAGCTAGGGTCATAAAACCATGGCAGAAGCATCGTGCACGGTTCCCTTGGCTTCACTACAAATCATTGAGGAAGGCATCATATCTGGATCGACGGGTTCTTTTGTGCCTAATTACAGATCCGCCCCATTGCATGATGTTGCGGTTCAGCTTTCATGACCTAGGGCATCTGGCGTTTGTAAAGGGAGCAGCTGTGATCCAGCCTAGTGTTGTTCCAGGAATGAAAGAGAAGCCAACCCACAGCTTTAGCTTACAACTATACCCTGCTAGCATATTGACAAACGCACTGAATGTTCTAAGCTATCTCTGTTTCAAGCGACATGATTCTGGCATTATCACAGTAAATCCCTCAGAAATGGAGATTGTTACAGGGCTGAATGAAGGAATGAAGATCATAGGTGGTCTGTCCTTGACAGATATTGGTTCCATCAGTTTCAATTGCTACAAGCCAATCAACATGAAGATTGTCAATCTTACTGATCTCTTCCTTGATGTTTCTGTCGCTCATTATGATGATATGATCGAAATTCACCATGTTGATGAGTCTGATGAGCTCCAAATTGTGCTTGGAAAAGTTCTTCCTAAAAGGATTGGTGTGAAGTTACATGACAAGAGTTCTCACTTTGGAGATATTCCCAGGGTCGGCTTTGCAATTAGCATTATTATACCGTCTGATGATCTGAGGCAGATCATTCAACATGTTGAAGCTAGCATATCTAAATCTGTTTCATTTCATGTAGCAAACATGAATGTGTTTATCAAAGCTGAAAGAAAAGTATGGAATTATGAGTATAATTACACGGATCCTCAAGCAGCAGGGAATGATTATCATGTGGGCTTCGAGATGCTTATGCCCCGGTATCCTCACTGTGTGTCATTGAAAGAGGCGTCATGGCTGGCTGATCGGTGTTTCGTGGGCCTTGTTACAATTCCTTTAAACTGTGTAGTTTTGCGGTTCAACATTGCAAAACAAATTCATATGATGTTTGTCATGGGAGCAAATTTGAAGCTCCCAAAATTCAGAAGTTTGGAAAATAGCCCAGAACCTTCAGAACAGGACTCTGAGGCTTTAAAAGACAGATCCATTGCTGAACTGTCAAACAGTGTATCAAAAGATGAACTATCTTCAAAGAAGAGCATGGAGCCTTCAACAGGTCAGCATGACACTCCACCGAATCCATCAAAAACCAAACGTCTGAAAGGTCCAGTTAAAACTAGACATACGACAAAGAATCGAAAACCTTCAAAACATCCCAAACCAAACAACAGGTTTAGTTTCCCAGCTGAACCTGAAACAGGAGAACAACGAAGGAGCTATGATATTGATGATGACAATAAAACTGACCCAACCATGGACAACCCTTTGAATGAGAACCCAGAACCCTTAAACCAGGACCAGTTACCTAAAATACATACATCTGAAACTTCAACTGATCCATCAATTGTCATATCTCCTAAAGAAAATGGTCCAGCCACCGCTGAACCCTCAGAAGAGGATTCAGAGTCTCAGATGCAAAACCCTGAAGCTTTGCAACTTCCACACACTGAAACTTCAGGAGATAACAGTAAAGACTTTGTTGTTGGGTCCATTCTTGCAATCAAAACCACTTTAGGAGAGGAATTTGAAGGCCGAGTTATCACCTTCGACCGACCCTTCAACATCCTTTTGCTTCAAGAGGGTTCAGAATCGGGACCAAATAAAAAAAACATAAGGCTTCTGAACACCAATTACATTGAGGAGTCTACCTTATTGCACCAATCAGAAGATCCTCTTGACCTCAAGACCTTCAATCTGAAAGCTTTATCTAAGACTAAGCTGAAAGAAGCAATCGAAGCTCTCAGGGATGCCAATTTCAATGAGCAAGGCAAGGGGGTAATTGAAGTTGGGCCTGAGGGATTGCAGATTACAGTCTCGAATATTGGATCAAAGGTTGTCGCATATCTACACTTGAAGGCTACGGGTTTTATCACATTCAATTACCAGAAGATAGTTGATCTGAATCAGATAGCCCAAAGTCTTTCGGTTGCTTCGGAGAATGATTCAGTTGCTATTCACCATGTTCATGGCTCGAATGAGCTCTCCTTCATGTTTGGAAAACGTCCCAGCAGAAAGTTTCCTGTAGAATTGCATGAAATTAATGGTAAGTTCGAGAAGGTTCCTGACATTACCTATGCTTGTGAAGCCTCTGTACCATCTGGAGTTCTGAGACGCATCATTGAAGAAGTTGAAGCCACTGCAACAAAAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_275115.p1 GENE.S_Transcript_275115~~S_Transcript_275115.p1 ORF type:internal len:1175 (+),score=252.29,PCNA_N|PF00705.14|0.0047,PCNA_N|PF00705.14|23,PCNA_N|PF00705.14|0.21 S_Transcript_275115:2-3523(+)
LFCLSTMREPSIEQPISLSLSLSSSSSPSPDSLSLSFHLSAMTEQNPSVTQASELNLEFSEDHSVRELLVGSEMVETSNDQSVPESLQGSEIVGILNDRVLADSLDGSGMVTSSDDQNLPGFLEGFEIVGTSNDKVLSGFLEGSEVVTSNGHFAPDSLEGSECVTTSYDQVVPDSLQGSGIVESLEGFAMAETSREQSVSESSDGSTMAETSREQSVAESLDRSAMDATSVIDTSGTSYSFRFQIHPASKLKHALEVLSDDDFNPQGSGLIKVGPNGVEIKALNIETRVLCCLEMGASGFVNFSYNEPFNKMVDLNKICNDLNLCDDGSVINIQHAYGSDELTFTFGESCPREFAVELAEMNDDFEKVPLITHTYESVINCEALREIINHVEASTSKAVFFNIADGIMSIKIEDQEWTCDYEKKVSARVIKPWQKHRARFPWLHYKSLRKASYLDRRVLLCLITDPPHCMMLRFSFHDLGHLAFVKGAAVIQPSVVPGMKEKPTHSFSLQLYPASILTNALNVLSYLCFKRHDSGIITVNPSEMEIVTGLNEGMKIIGGLSLTDIGSISFNCYKPINMKIVNLTDLFLDVSVAHYDDMIEIHHVDESDELQIVLGKVLPKRIGVKLHDKSSHFGDIPRVGFAISIIIPSDDLRQIIQHVEASISKSVSFHVANMNVFIKAERKVWNYEYNYTDPQAAGNDYHVGFEMLMPRYPHCVSLKEASWLADRCFVGLVTIPLNCVVLRFNIAKQIHMMFVMGANLKLPKFRSLENSPEPSEQDSEALKDRSIAELSNSVSKDELSSKKSMEPSTGQHDTPPNPSKTKRLKGPVKTRHTTKNRKPSKHPKPNNRFSFPAEPETGEQRRSYDIDDDNKTDPTMDNPLNENPEPLNQDQLPKIHTSETSTDPSIVISPKENGPATAEPSEEDSESQMQNPEALQLPHTETSGDNSKDFVVGSILAIKTTLGEEFEGRVITFDRPFNILLLQEGSESGPNKKNIRLLNTNYIEESTLLHQSEDPLDLKTFNLKALSKTKLKEAIEALRDANFNEQGKGVIEVGPEGLQITVSNIGSKVVAYLHLKATGFITFNYQKIVDLNQIAQSLSVASENDSVAIHHVHGSNELSFMFGKRPSRKFPVELHEINGKFEKVPDITYACEASVPSGVLRRIIEEVEATATKN

Click here to download the sequence:
Link to NCBI Protein BLAST