Transcript Information: S_Transcript_275288.p1


Annotated TAIR IDAT3G47630.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17563254-17565162 | Reverse length=332
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3286376080783
Replicate 20.55156973893787
Replicate 31.613739407315
Condition 2: 8 Hour
Replicate 15.5979149582474
Replicate 22.7964810799658
Replicate 32.1315847604981
Condition 3: 24 Hour
Replicate 11.6383662617946
Replicate 20.56659528940868
Replicate 31.5763777753198


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_275288.p1 GENE.S_Transcript_275288~~S_Transcript_275288.p1 ORF type:5prime_partial len:80 (+),score=13.59 S_Transcript_275288:1-240(+)
GTTCATACCCGGAATCTTACTGTTCAATTAACTTCCATAAAACTCAAATTGAGAAAGAAAAGGAATATCTATTATTTCGGCAGGGGATCTGGTGCAGCTTCTCAGGAATTCATTTTGTGTCATGCCATTTCCGACGAGAAGAAAAGGGAGGAGCTTGCTTGTTTGTTGACTGCACTCCCCCCTGTGGAATTTTGTTGTGTATGGGGTTCAAGTCTTCATCCTAACAATCATGAAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_275288.p1 GENE.S_Transcript_275288~~S_Transcript_275288.p1 ORF type:5prime_partial len:80 (+),score=13.59 S_Transcript_275288:1-240(+)
VHTRNLTVQLTSIKLKLRKKRNIYYFGRGSGAASQEFILCHAISDEKKREELACLLTALPPVEFCCVWGSSLHPNNHEI*

Click here to download the sequence:
Link to NCBI Protein BLAST