Transcript Information: S_Transcript_27542.p1


Annotated TAIR IDAT2G43630.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67 Blast hits to 67 proteins in 20 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18096255-18097344 | Forward length=274
E-Value3.8E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.9896471717
Replicate 249.888920060666
Replicate 352.317149298377
Condition 2: 8 Hour
Replicate 171.635902983675
Replicate 272.41173865838
Replicate 364.817577411066
Condition 3: 24 Hour
Replicate 141.014883288462
Replicate 244.310064265594
Replicate 343.237790408771


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_27542.p1 GENE.S_Transcript_27542~~S_Transcript_27542.p1 ORF type:complete len:245 (+),score=55.69 S_Transcript_27542:261-995(+)
ATGAATGCCATTCAGATTAACAATGCAATAATAGTATGCCCTCAAGCTTTACAAAGGAGGCAGCCCCTTTTATCTTCTTCTTCTATAGCATTGCCCCGCCTTCGAAGTCCGAGGGTTTTGAATTCTCTTAAACTGACAAATGGTGGGCACAAGAAGTGCTTACGTTTGTCCCCTGTTTGTTTGGCTCGTGATGGAGCAATTTCAGGCAGTGGAGATCAGGAACCTCTTTGGAAATCTTTTGGAAAAGCCTTAGAAAATTTTGGGAAAAAATCTTCTGTGGAAGATGTATTGAAACAGCAGATTAAGAATCAAGAATATTATGATGAAGATGGCAGTGGTGGAAATCCTCCAGGGCGTGGAGGAGGAGGAGGTGGTGGTGGATTTGGTGAATCTGAAGAAGATGGCTACTCTGAGATTCTGGATGAGACGATTCAAGTGGTCTTAGCAACCCTTGGGTTCATCTTTGTGTACATGTATATCATCAATGGCGCAGAGATGATGAGGCTGGCTAAGGACTACATCAAGTTTCTGCTTGGAGGCAAAAAGAGTGTCCGTCTAAGTCGTGTACTGTATCAATGGGAACGGTTCTGTAAAACCTTCACAGAGAAGAAGGAGGTTGACAGGTATTGGTTGGAGAAAGCGATTATCAACACCCCAACTTGGTGGGATAGTCCTGAAAAGTACAGGCGCATTCTCAAAGCTTACATGCAAACGCAATCAGAGCCCAATGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_27542.p1 GENE.S_Transcript_27542~~S_Transcript_27542.p1 ORF type:complete len:245 (+),score=55.69 S_Transcript_27542:261-995(+)
MNAIQINNAIIVCPQALQRRQPLLSSSSIALPRLRSPRVLNSLKLTNGGHKKCLRLSPVCLARDGAISGSGDQEPLWKSFGKALENFGKKSSVEDVLKQQIKNQEYYDEDGSGGNPPGRGGGGGGGGFGESEEDGYSEILDETIQVVLATLGFIFVYMYIINGAEMMRLAKDYIKFLLGGKKSVRLSRVLYQWERFCKTFTEKKEVDRYWLEKAIINTPTWWDSPEKYRRILKAYMQTQSEPNE*

Click here to download the sequence:
Link to NCBI Protein BLAST