Transcript Information: S_Transcript_275521.p1


Annotated TAIR IDAT3G62770.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)AtATG18a
Annotation TypeOrtholog
Chromosome Positionchr3:23218858-23221110 | Reverse length=425
E-Value6.7E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2811143915869
Replicate 22.1012180530966
Replicate 31.756451055581
Condition 2: 8 Hour
Replicate 13.2495832864203
Replicate 22.9829131519636
Replicate 35.0752018107099
Condition 3: 24 Hour
Replicate 13.1206976415135
Replicate 22.5901498944397
Replicate 32.4020994671539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_275521.p1 GENE.S_Transcript_275521~~S_Transcript_275521.p1 ORF type:5prime_partial len:105 (+),score=10.16 S_Transcript_275521:2-316(+)
CTCACTCCTTGGCCCTACTCAGCCCACTTAGTAGTTAGTTCTGTCCCGCCCCGACCTGTCCCTCTGCTCAGCCTGCACTTTAACCAGGTTAGTTGCAACTTGCAACCATATGCCTGCCATTCTGCTGACTGCAATAAACTGTGCCGCTTGTTTTCTTTCCATAGAGAGATTGATTATTGGATGATTGATGGAGTAAAACTCATGAAATCTCTTCTGGAATGCAGCTTCTATCGATGCCAATTTGATCCTGTGAAAGGTGGGGAGATGACTCAACTGGAATATCACAACTTTCTGAAGCCTGAGGAACCATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_275521.p1 GENE.S_Transcript_275521~~S_Transcript_275521.p1 ORF type:5prime_partial len:105 (+),score=10.16 S_Transcript_275521:2-316(+)
LTPWPYSAHLVVSSVPPRPVPLLSLHFNQVSCNLQPYACHSADCNKLCRLFSFHREIDYWMIDGVKLMKSLLECSFYRCQFDPVKGGEMTQLEYHNFLKPEEPF*

Click here to download the sequence:
Link to NCBI Protein BLAST